Panicum hallii (Hall's panicgrass): 112886530
Help
Entry
112886530 CDS
T07366
Name
(RefSeq) putative E3 ubiquitin-protein ligase SINA-like 6
KO
K04506
E3 ubiquitin-protein ligase SIAH1 [EC:
2.3.2.27
]
Organism
phai
Panicum hallii (Hall's panicgrass)
Pathway
phai04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
phai00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
112886530
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
phai04121
]
112886530
Enzymes [BR:
phai01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
112886530
Ubiquitin system [BR:
phai04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
SINA (Seven in absentia) proteins
112886530
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sina_RING
Sina_ZnF
zf-RING_5
Motif
Other DBs
NCBI-GeneID:
112886530
NCBI-ProteinID:
XP_025808239
LinkDB
All DBs
Position
3:7679982..7683304
Genome browser
AA seq
329 aa
AA seq
DB search
MRPARSMKRAKREKAAKEAASPGSAGANKKEMGSSGSRPASAAAAAAGAEAVAYVAAEDA
DALECGVCFHPLKPPIFQCDEGHVVCSLCRDKLAPAGKCHVCGIATRDYHRCHAMERLLE
SIRVSCPNAAHGCGARPAYYDQHDHCQTCPHAPCHCPGKDCNFLGSTEALLDHFTSAHGW
PSTTKISAFETCCICLRDGFNFILADCTEDDDHLTTSSSSRRYLFLLNVTRQSLGCSITV
HFTGHESPSEALICVLGYSRVLYDPRDRHKFLGSHSLQSEINVECMDLSNGLPNPEDCFQ
FVVPDSVIRKKDKKDGIRAEVRIGIINLE
NT seq
990 nt
NT seq
+upstream
nt +downstream
nt
atgagaccggccaggtcaatgaaacgggcgaagcgagagaaggcagcgaaggaggcggct
tctccgggaagcgctggcgccaacaagaaggagatgggttcctccggttcgaggcccgcg
agcgcagcggcagcggcggcgggggcggaggcggtggcgtacgtggcggcggaggatgcc
gacgccctcgagtgcggtgtgtgcttccacccgctcaagccccccattttccagtgtgat
gagggccatgtggtgtgctctctgtgccgtgacaagctcgcgccagcaggcaagtgccat
gtgtgcggcattgccacgcgtgactaccacaggtgccacgccatggagcgcctgttggag
tccatccgtgtctcatgcccaaatgcagcccatggctgtggtgccagaccggcctactat
gatcagcatgaccactgtcaaacgtgtccacacgcgccgtgccactgcccgggcaaggac
tgcaacttccttggctcgacagaagcgctcctggaccacttcaccagtgcacatggttgg
ccttccaccaccaagatcagtgcctttgagacatgctgcatctgcctccgcgacggattc
aacttcatcctcgctgactgcactgaggacgacgatcatttaactaccagcagcagcagc
cgtcggtacctgttcctcctgaacgtgacgcggcaatcacttggctgctccatcactgtg
cacttcaccggtcatgagtcaccctcagaagcactaatatgtgtgctcgggtactcacgg
gtactttatgaccctcgtgatcgtcataagttcctgggcagccattctctgcaatctgag
atcaatgtggaatgcatggatctctccaatgggctgcccaaccctgaggactgcttccag
ttcgtcgtgccagattctgttattagaaagaaagacaagaaggatggtatccgcgctgaa
gtccgtatcggcatcatcaatctggagtag
DBGET
integrated database retrieval system
