KEGG   Panicum hallii (Hall's panicgrass): 112886813
Entry
112886813         CDS       T07366                                 
Name
(RefSeq) uncharacterized protein LOC112886813
  KO
K10666  E3 ubiquitin-protein ligase RNF5/185 [EC:2.3.2.27]
Organism
phai  Panicum hallii (Hall's panicgrass)
Pathway
phai04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:phai00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    112886813
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:phai04121]
    112886813
Enzymes [BR:phai01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     112886813
Ubiquitin system [BR:phai04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    112886813
SSDB
Motif
Pfam: zf-C3HC4 zf-C3HC4_2 zf-C3HC4_3 zf-RING_UBOX zf-RING_5 zf-RING_2 RING_XB3-XBAT31 zf-C3HC4_4 Prok-RING_4 zf-ANAPC11 Baculo_IE-1 zf-rbx1 zf-RING_6
Other DBs
NCBI-GeneID: 112886813
NCBI-ProteinID: XP_025808595
LinkDB
Position
3:complement(15865239..15867583)
AA seq 552 aa
MAADDAARSSRRMDLNLYLGLPRASRARRPDLGSDLALGTPMLSSSSPSSSAASADAPPP
EGEPFHPPYSPSRADLVRPPTPAHEPYDPFAPEALPPYMPPPPLPAPGALPVLADELEFG
FSDAHLGLVERLADRPSSSTASSSFRPDRAERYRRLMCLTGSRYIRPRRFRSDLPPLSSE
APSMENDAVPQPPEPEEPVHDTVEENKVVADGAVVGVSEDEGAEHGKSAAMFECNICFEM
AAEPVVTSCGHLFCWPCLYQWLHVHSSHKECPVCKGEVTEGNITPIYGRGNSGSDVEKKV
AEDGNASGPKIPPRPHGNRLESFRQQFHHLRPISRRLGEAHGFLSTWRRILDQHLMNSVS
RFEGPPEATAQEIPQNASRFSRMTTRLRARRLQREAENPTSITSSAPGSGGQPGNHTSDL
PRRTLSPFPSEGMDLLRHFDFDLDDSERFVTAFSELRRIARPSHYGASTSSNPPNPEPAD
GTHIVTGLAADQASNSSTMAVIQEDAAFTESAGEPSNAGSSRSLRRRRASDALGSLDVDG
GDLHQNKRRRLN
NT seq 1659 nt   +upstreamnt  +downstreamnt
atggccgccgatgacgcggcgcggagcagcagacggatggatctgaacctctacctcggc
ctcccccgcgcgtcgcgcgcccgccgccccgatctcggctccgacctcgcgctcggcacc
ccgatgctgtcgtcgtcgtcaccctcctcctcggccgcctccgcggacgcgccgccgccg
gagggcgaaccgttccacccgccctactcgccgtcccgcgccgacctggtgcgcccgccg
accccggcgcacgagccctacgacccgttcgcgcccgaggctctcccgccctacatgcct
ccgccgcccctgccggctccaggggctttacctgtactcgccgatgagcttgagtttggt
ttctccgacgcgcacctgggtctggtcgagcggttagcagaccgaccgtcgtcgtcgacg
gcatcctcttccttccgcccggatcgtgccgagcgctaccgccgcttgatgtgcttgact
gggtctcgctacatccggccaagaagattccggtcagaccttccacctctcagctcagag
gcccctagcatggagaatgatgctgtaccacaaccaccagaaccggaagagcctgtgcat
gatactgtggaggagaacaaggtggttgctgatggcgctgttgtgggtgtctcagaggac
gagggagccgagcatggtaagagtgccgcaatgttcgagtgtaatatctgctttgaaatg
gctgctgagccggtggttacctcctgcggccatcttttctgctggccatgtttatatcag
tggttgcatgtccactctagccataaggagtgccctgtctgcaaaggtgaggtgactgaa
gggaacattactcctatctatgggagagggaattcaggctcagatgtggagaagaaggtt
gcagaggatggaaatgcatctggccccaagattccgccgaggccgcatgggaatcggcta
gagagtttccggcagcagttccaccatttgcgacccatatctagaaggcttggtgaggca
catggttttttgtctacgtggaggcgcattcttgatcagcatttaatgaatagcgtgagt
agatttgaagggcctcctgaagcaactgcccaggaaattcctcagaatgcaagccgtttt
agccgaatgactactaggttgagagcaaggaggttgcaaagagaagcggaaaaccctaca
tccattacttcatctgctccaggtagtggtgggcagcctggaaaccatacatccgatctg
ccaaggcgcactttaagtccatttccctcagaagggatggatttattgcgacactttgac
tttgatcttgatgactcggaaaggtttgtgactgctttcagtgaacttaggcgaattgca
aggccaagccattatggggcatcaacctcatcaaacccaccaaatcctgagcctgctgat
ggaactcatattgtcacgggactggctgcagatcaagcttctaattcaagcaccatggct
gtgattcaggaagatgcggcttttactgaaagcgctggagaacctagtaatgcagggtct
tcaagatccctgaggaggaggagagcaagtgatgccttaggttctttggatgtagatggt
ggggacctacatcagaacaagagaagacgcctaaactaa

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