KEGG   Panicum hallii (Hall's panicgrass): 112886835
Entry
112886835         CDS       T07366                                 
Name
(RefSeq) E3 ubiquitin-protein ligase RNF5-like
  KO
K10666  E3 ubiquitin-protein ligase RNF5/185 [EC:2.3.2.27]
Organism
phai  Panicum hallii (Hall's panicgrass)
Pathway
phai04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:phai00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    112886835
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:phai04121]
    112886835
Enzymes [BR:phai01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     112886835
Ubiquitin system [BR:phai04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    112886835
SSDB
Motif
Pfam: zf-C3HC4 zf-RING_2 zf-C3HC4_2 zf-C3HC4_3 zf-RING_5 zf-RING_UBOX RING_XB3-XBAT31 zf-C3HC4_4 zf-ANAPC11 Baculo_IE-1 zf-RING_10 Prok-RING_4 TRAF3_RING Sina_RING zf-LITAF-like
Other DBs
NCBI-GeneID: 112886835
NCBI-ProteinID: XP_025808624
LinkDB
Position
3:63904285..63907027
AA seq 231 aa
MAANVGQSTSGSSSGADAGGSFECNICFELPQEPIVTLCGHLFCWPCLYKWLRIHSHSPE
CPVCKAVVEEDKLVPLYGRGKDRVDPRSKNVPGPDIPNRPAGQRPPTAPQADPNNHFPNA
NPNPWFMGGGIPLANARWGNYTFSAAFGGLFPLLSFQVHGFPDATAYGQPAGFPYGYGHG
HGHAFHGGHAGHAHAAAPRHGPHGQQQQADVYLKALLILVGFLVIASLITF
NT seq 696 nt   +upstreamnt  +downstreamnt
atggcggcaaatgtcgggcaatcgacaagcggcagcagcagtggcgctgatgccgggggt
agtttcgagtgcaacatatgctttgagctgccacaggagccgattgtaacgctctgtggc
cacctcttctgctggccatgcctttacaaatggctgcgcatccactcgcactcaccagag
tgcccagtgtgcaaggctgtcgtcgaggaggataagctcgtccctctgtatggccgcggc
aaggaccgtgtcgacccaaggtcaaagaacgtcccagggcctgacattcccaaccggcca
gctgggcagaggcctccaactgctccacaggccgatcctaacaatcacttccccaatgcc
aacccaaacccatggttcatgggtggaggcatcccgctggccaatgcacggtgggggaac
tatacgttctcggctgcgttcgggggtttgttcccgctgctcagcttccaggtgcatggg
ttccctgatgcaacagcttatggtcagccggctgggttcccttacgggtatgggcacggc
catgggcatgcgtttcacggtgggcatgcaggacatgctcatgctgcagctccccggcat
gggccacatgggcaacagcagcaggcggatgtgtacctgaaggcgctgctcatcctggtt
ggatttcttgtgatcgcaagcctcatcacgttctag

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