Panicum hallii (Hall's panicgrass): 112886955
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Entry
112886955 CDS
T07366
Name
(RefSeq) ATP-dependent DNA helicase DDX11
KO
K11273
chromosome transmission fidelity protein 1 [EC:
5.6.2.7
]
Organism
phai
Panicum hallii (Hall's panicgrass)
Brite
KEGG Orthology (KO) [BR:
phai00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
phai03036
]
112886955
Enzymes [BR:
phai01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
112886955
Chromosome and associated proteins [BR:
phai03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Other sister chromatid cohesion factors
112886955
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD_2
Helicase_C_2
ResIII
DEAD
AAA
DUF3175
Motif
Other DBs
NCBI-GeneID:
112886955
NCBI-ProteinID:
XP_025808788
LinkDB
All DBs
Position
3:complement(5028073..5033916)
Genome browser
AA seq
877 aa
AA seq
DB search
MPTPPMPPPPTPREEFPAFPFAPYPIQSEFMSFLYTALSSGPGALALLESPTGTGKTLSI
ICSALQWLLDRRDAAATAPAHPGGVAGPGVDEDEPDWMRDFTPLPPEKEVAKKKKKKTKP
PAMRKTAGSGKPDGFGEQGAGDDDAEFLLEEFESEGEDGAMRGVGKRAHCGSISSSSSSD
GESDEEEEEVTPKVYFTSRTHSQLSQFVGELKRTEFVGRLRTVALGSRKNLCINKDVLKL
GSANRINERCLELQKNKKSSKTKVEDDKRKARNAKNSCGCPMLRNRSLQKEFRSEVSDQG
ALDIEDLAHIGKKIGTCPYYGSRDMVRSADLVVLPYQSLLLKSARESLGLNLKNSVVIID
EAHNLADSLTSMYNSKITSSQLKAVLSHLDAYLNRFHNVLGAGNRRYIQTLTVLTRSFLR
VLTNNQDGASTLSSMTINQFLFSLDIDNINIVKLCQYVKESNIIHKVSGYANRTTCIQAG
VNQFDLQQEHDEGSSISCFQALIDFLRSLMNSNDDGRIIVAKQKLSGQPEEAYLKFVMLC
AEKLFSEVTRDAYAVILAGGTLQPIEETRLRLCPSLPPADIKFFTCNHIVPPESILPIAV
TRGPSGMTFDFSYNSRSSTSMIEELGRFICNIVTVVPEGVVMFFSSYDYERRVYDAWTAA
GTISKICKKKHVFREPRNSADVEAVLNKYKEKIQSCSKNSQDTGINGALLLAVVGGKISE
GINFSDGMGRCVIMVGLPYPSPSDVELIETIKHIETISSSFLVGDDKASGRKYDDECELQ
PGYNILRKCTKGGKEYYENLCMKAVNQSIGRAIRHINDYAAMLLVDSRYAQTSSSKSYSS
PTDKLPPWIKARLSCTQNYGEVHRLLHQFFKFNKQKR
NT seq
2634 nt
NT seq
+upstream
nt +downstream
nt
atgccaacgccgccgatgccgccgccgccaacgccgcgggaggaattcccggcgttcccg
ttcgcgccgtacccgatccagtcggaattcatgtcgttcctctacactgccctctcctcc
ggccccggcgccctcgcgctactggagagccccaccggcactggcaagacgctcagcatc
atctgcagcgcgctccagtggctcctcgaccgccgcgacgccgccgctacggcgccggcc
caccccggcggcgtcgctggccccggggtggacgaagacgagcccgactggatgcgggat
ttcacgccgctgccgccggagaaggaggtcgcgaagaagaagaagaagaagaccaagcct
ccggcgatgaggaaaacggcgggttcggggaaacccgacgggtttggggagcaaggcgcc
ggcgacgacgatgcggagttcctgctggaggagtttgagagcgaaggcgaagacggcgcg
atgcgcggggtggggaagcgtgcacattgcggtagcatcagcagcagcagcagcagcgac
ggcgagtcggatgaggaagaggaggaggtgacgcccaaggtttacttcacgagccgcacg
cactcgcagctctcgcagttcgtgggggagctcaagaggacggagtttgtggggaggctc
aggacggtggcattggggtccaggaagaacttgtgcatcaacaaggatgttctgaagctt
ggcagtgcaaaccggattaatgagcggtgcttggaactgcagaagaacaagaagagcagc
aaaactaaggttgaggatgataaaagaaaggcacgcaatgcaaagaactcttgtgggtgc
ccaatgttaagaaatagaagccttcagaaagagttcaggagcgaagtgtcagaccaaggt
gcattagacatcgaggatttggcacacataggaaagaagattggaacatgcccctactat
ggttcacgggacatggtccgctcagctgaccttgtagtccttccttatcaatctttattg
ctgaagtctgctagagaatcgcttggccttaatctgaagaacagtgttgtcatcatagat
gaggctcacaacttagctgattctctgaccagcatgtacaattcaaagattacatcttct
cagttgaaggcagttctttcccacctggatgcataccttaacagatttcacaatgttttg
ggagctgggaatcgacgatacatccagacattgacagttttaacaaggtctttcctacga
gttttgaccaacaatcaagatggtgccagcaccttgtcttctatgaccataaaccaattc
ttgttttcccttgacattgataacataaacatagtgaaactttgtcagtatgtaaaagaa
agcaatataattcacaaggttagtggatatgccaacaggacaacttgcatccaagctggt
gtaaatcagtttgatctccagcaggaacatgatgaaggaagcagtatatcatgctttcag
gcattgattgactttctacgctcccttatgaacagcaatgatgatggaagaatcattgtt
gcaaagcaaaagctcagtggacaacctgaagaagcatatcttaaatttgtgatgctttgt
gcggaaaaattattttcagaggtcactcgggatgcttatgctgttatccttgctggtgga
accctccagcctattgaagaaactaggctacgcttgtgtccaagcttgccaccagctgat
ataaaattctttacatgcaaccatattgttcctcctgagagtattcttccaatagctgtt
acacgtggaccctcaggcatgacatttgatttcagctacaattcaaggagctctacttcc
atgattgaagagcttggacgtttcatctgcaatattgtaacagttgtgcctgagggagtt
gttatgtttttttcttcttatgattatgaaaggcgtgtatatgatgcatggacggctgca
ggcacaatttccaagatttgtaaaaagaaacatgttttcagagaaccaaggaacagtgct
gacgtcgaggctgtcctcaacaaatacaaggagaaaattcaatcctgtagtaaaaattcc
caagacacaggcatcaatggggcacttttattagctgtcgttggtggtaagatttctgaa
ggtataaactttagtgatgggatgggtcgttgtgtaataatggttggcttgccctatcca
agtccatctgatgttgagctgatagagacaataaagcatatcgaaactatttctagctca
tttttggttggagatgataaggcgtcagggagaaaatatgatgatgaatgtgaacttcag
cctggttacaatatattacgaaagtgcactaaaggtggaaaagagtattatgagaacctg
tgcatgaaagctgtgaatcaatctattggcagagcaatcaggcacataaatgattatgct
gcaatgctattggttgactctcgttatgcacagacttcatcaagcaagagttattccagc
ccaactgataagcttcctccatggataaaagcacgactctcttgtactcaaaactatgga
gaagtccatagactgttgcatcagttcttcaaattcaataaacaaaaacgttga
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