Panicum hallii (Hall's panicgrass): 112887021
Help
Entry
112887021 CDS
T07366
Name
(RefSeq) cell division cycle 20.2, cofactor of APC complex-like
KO
K03363
cell division cycle 20, cofactor of APC complex
Organism
phai
Panicum hallii (Hall's panicgrass)
Pathway
phai04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
phai00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
112887021
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
phai04121
]
112887021
03036 Chromosome and associated proteins [BR:
phai03036
]
112887021
Ubiquitin system [BR:
phai04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
APC/C
Target recognizing subunit
112887021
Chromosome and associated proteins [BR:
phai03036
]
Eukaryotic type
Sister chromatid separation proteins
APC/C complex
112887021
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_CDC20-Fz
WD40
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
WDR55
ANAPC4_WD40
Beta-prop_WDR19_1st
Beta-prop_EML
Beta-prop_IFT140_1st
EIF3I
Beta-prop_RIG_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_HPS5
Beta-prop_EIPR1
eIF2A
Beta-prop_WDR35_TULP_N
Beta-prop_WDR75_1st
Ge1_WD40
WD40_MABP1-WDR62_1st
RMC1_N
NBCH_WD40
Beta-prop_VPS8
WDR54
Beta-prop_RIG_1st
Beta-prop_DCAF4
CFAP43_N
Beta-prop_SCAP
Beta-prop_SPT8
Beta-prop_NUP159_NUP214
Motif
Other DBs
NCBI-GeneID:
112887021
NCBI-ProteinID:
XP_025808881
LinkDB
All DBs
Position
1:53209685..53220417
Genome browser
AA seq
473 aa
AA seq
DB search
MDAGSHSISSEKSRAAAPRPPLQEAGSRPYMPSLSTGSRNPSAKCYGDRFIPDRSAMDMD
MAHYLLTEPRKDKENAAGVVASPSKEAYRRLLAEKLLNNRTRILAFRNKPPEPENVSFAE
AASSNLQAKPAKQRRHIPQSAERTLDAPELVDDYYLNLLDWGSNNVLSIALGDTVYLWDA
SSGSTSELVTVDEDSGPITSVSWAPDGRHIAVGLNSSDVQLWDTSSNRLLRTLRGVHEAR
VGSLAWNNSILTTGSMDGKIVNNDVRIRNHVVQTYEGHSQEVCGLKWSGSGQQLASGGND
NLLHIWDVSMASSMPSAGRNQWLHRLEDHTAAVKALAWCPFQSNLLATGGGGSDRCIKFW
NTHTGACLNSVDTGSQVCALLWNKNERELLSSHGFTQNQLTLWKYPSMVKMAELTGHTSR
VLFMAQSPDGCTVASAAADETLRFWNVFGAPEAPKPAAKASHTGMFNSFNHIR
NT seq
1422 nt
NT seq
+upstream
nt +downstream
nt
atggacgcaggttcccactcgatctcctccgagaagagccgcgccgccgccccgcggccg
ccgctccaggaggcgggctcccgcccctacatgccgtcgctgagcacggggtcgcgcaac
ccgtcggccaagtgctacggcgataggttcatcccggacaggtcggcgatggacatggac
atggcgcactacctgctcacggagcccaggaaggacaaggagaacgcggcgggcgtcgtg
gcctccccgtccaaggaggcgtaccggaggctgctcgcggagaagctgctcaacaaccgg
acgcggatcctcgccttcaggaacaagccgccggagcccgagaacgtctccttcgccgag
gcggcttcctccaacctgcaggccaagccggccaagcagcggcgccacattccccagtct
gctgagcggactctggacgcgccggagctcgttgatgactactacctcaacctgcttgac
tgggggagcaacaacgtgctgtccattgctttgggcgacacggtgtacctgtgggacgca
tcgagcggatccacatctgagcttgtgaccgtcgacgaggacagcggtcctattactagc
gttagctgggctcccgatggtcggcacattgctgtcgggctcaactcgtctgacgttcag
ctctgggacaccagctccaaccgactgttgagaactcttagaggggttcatgaggcaaga
gtcggctcgctggcatggaacaacagcatcctgacgaccggcagcatggacggcaagatc
gtgaacaatgacgtgaggatcaggaaccacgtcgtgcagacgtacgaggggcacagccag
gaggtgtgcggcctcaagtggtctggatcagggcagcagttggccagcgggggcaacgac
aaccttctgcacatttgggatgtgtccatggcatcctccatgccatctgctggccgcaac
cagtggctgcacaggctcgaggaccacacggccgctgttaaggcactcgcctggtgccca
ttccagagcaacttgctggccactggtggcggtggtagcgatcggtgcatcaagttctgg
aacacgcacactggtgcgtgcctgaactccgttgacaccggatcacaggtgtgtgctctt
ctctggaacaagaatgagagagagctgctgagttcacacggattcacacagaaccaactg
actttgtggaagtatccatcaatggtgaagatggctgaactcactggccatacctctcgt
gtccttttcatggctcagagtcctgatggttgcacggtagcatcagctgctgcagatgag
accctccggttctggaacgtttttggagcccctgaagcgcccaagcctgcagcaaaggct
tcccacactgggatgttcaacagcttcaaccatatccgttag
DBGET
integrated database retrieval system
