Panicum hallii (Hall's panicgrass): 112887107
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Entry
112887107 CDS
T07366
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 1
KO
K14807
ATP-dependent RNA helicase DDX51/DBP6 [EC:
5.6.2.7
]
Organism
phai
Panicum hallii (Hall's panicgrass)
Brite
KEGG Orthology (KO) [BR:
phai00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
phai03009
]
112887107
Enzymes [BR:
phai01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
112887107
Ribosome biogenesis [BR:
phai03009
]
Eukaryotic type
Pre-60S particles
Helicases
112887107
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GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Utp25_C
CMS1
Motif
Other DBs
NCBI-GeneID:
112887107
NCBI-ProteinID:
XP_025808987
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All DBs
Position
1:complement(58028409..58033823)
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AA seq
520 aa
AA seq
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MVAMARNDEEEGPADRVPHLPWMRYPVDIDAFSGCPVAQLPRLDPRLAGALQRMGIESFF
PVQEAAWVETIGPGAFERDVCINSPTGSGKTLAYALPIVQMLSTRKVRCLRALVVLPTRD
LALQVKEVFDAIAPVVGLSVGSAVGQSSLADEVSNLVRKPKQELYPTIDEEYVKMEPQTK
VDILVATPGRLMDHINMTNGFSLEHLQYLVIDETDRMLREAYQSWLPTVIQLTHSIGQDR
SWHDTDGKTLLHPLTTIRRSGVERGFKGKCYPRLAKIVLSATLTQDPSKLSQLELHHPLL
LNSGKKRYRIPTKLESYKLICTSNLKPLSLIVLLQELQGNKCLVFTSSVESSHRLSTLLG
FFEDLPFKFSEYSRLQRESTRRKTLEAFKEGEIDVLIGTDRMARGIHIDGLRYVINYDMP
PYVKTYIHRAGRTARAGESGSCFTFLRKHEVKTFDKMLKKADNASCSLHSLPEESIETLR
PVFSSALKKLEESLESEAAKKSNSRDKIPSGSKRKRTNQK
NT seq
1563 nt
NT seq
+upstream
nt +downstream
nt
atggttgccatggcgaggaatgatgaggaagaggggcccgcggaccgcgtgccgcacctg
ccgtggatgcggtaccccgtcgacatcgacgccttctccggctgccccgtcgcgcagctt
ccccgcctcgaccccagattagcaggggctttgcagagaatgggaattgaatcatttttc
ccagttcaagaagcagcttgggtggaaacgattggtcctggtgcttttgagagggatgtc
tgtattaactccccaactggatctggcaaaactctagcttatgccctacctattgtgcaa
atgctctccactcggaaagtaaggtgtttgcgtgctttggttgtgcttcctacacgggat
ttagccttgcaggttaaagaggtttttgatgctattgctcctgtggtgggcttgtcagta
ggttcagcagttggccaatcgtcattagcagatgaagtttccaatcttgtcaggaagccc
aaacaagagctttacccaactattgatgaagaatatgtcaaaatggaaccacagactaaa
gttgatatattggtggcaacacctggaagactgatggatcacattaacatgacaaatggt
ttcagtctggagcatcttcagtacctggtcattgatgaaacagataggatgttaagagag
gcttaccaatcctggttgccaacagtgatccaacttacacactcaattggccaagatcgt
tcctggcacgacactgatgggaaaactctacttcatccattgactactattagaagatca
ggtgttgagcgtgggtttaaaggtaaatgctatccaagattagcaaagatagttttgtct
gctacactgactcaagatcctagcaagctttctcaactcgagttgcaccaccccttattg
ttgaatagtgggaagaagcgttacagaattcctacaaaacttgaatcctacaagctgatt
tgtacatcaaacttaaagccactctctctcattgttcttctccaagagctgcaagggaac
aagtgcttagtttttacctcatctgtagaatcaagccacagactaagcacattgctggga
ttttttgaagacttaccctttaaatttagtgaatattcacgcttgcagcgagaatctact
cgaaggaagacactggaggccttcaaggaaggggaaatcgatgttctgatcggtactgat
agaatggctcgtggaatacatattgatggtttaagatatgttatcaattatgatatgcca
ccatatgtgaaaacatacatacatcgagcgggtcggactgcaagagcaggggagtctggt
tcctgcttcacctttttaagaaaacatgaggttaaaacttttgacaaaatgctgaagaag
gctgacaatgctagctgcagtcttcattcattgcctgaggaatcaatagaaacacttcgt
ccagttttctccagtgctctgaaaaaactggaagagtctctggaatcagaagcagcaaag
aaatctaattcaagagataaaatcccaagtggttctaaacgaaagagaacaaaccagaag
tga
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