Panicum hallii (Hall's panicgrass): 112887261
Help
Entry
112887261 CDS
T07366
Name
(RefSeq) uncharacterized protein LOC112887261
KO
K11671
nuclear factor related to kappa-B-binding protein
Organism
phai
Panicum hallii (Hall's panicgrass)
Pathway
phai03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
phai00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
112887261
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
phai03036
]
112887261
Chromosome and associated proteins [BR:
phai03036
]
Eukaryotic type
Chromatin remodeling factors
INO80 complex
112887261
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ASXH
Motif
Other DBs
NCBI-GeneID:
112887261
NCBI-ProteinID:
XP_025809177
LinkDB
All DBs
Position
3:6325363..6331068
Genome browser
AA seq
1327 aa
AA seq
DB search
MAIVRTGAGVRLPRLDGGGEGSPEATEDDEESRATPSQESGADGFSGGEEEEGEEEEEEN
GGGGEEPEEAEDELGEEELELEEEEEEGDSGMGSDELEVTELGEPGAEMCQVGDQSVAVP
LELYDLAGLSDVLSLDAWNTLLSEDERIRLAALLPDMDQETFARTLVELLSGQNFHFGSP
LAALFKQLKGGLCDPRVNLYRRGTRFAERRKHYYWLQSYHNSMVRGLWEIKDCWKGREGY
SLDERLRMLDALKAKQQQRKALALAWRSGSETDSGSRESGKQVLNQLKLDKIGQKKAGKL
AKERSKGLLRVNMLKGVDEEYGEGSGRDAAVALSRQDNVYGYDSGTHRGKLHRSIDGLYS
EELGYERDSSRTRFPRLLPKPVKKKELTTSYDGNLYGNNYHDNNNASPYYYGRNPGPNQG
VTLAAAYDPPYFDTRRNARYSERDWVQGGKGVQSKALTGDEMHWTASTHTGQVDDWQKGK
LAGDYRSRKDQAGYGLKVKSYKSIEQQTNDARIGSDPRSKISQVKMAGKSSSQFDRISQK
HSRGNAAYSQSEETESDSSEQFEDSGDVHFLERKPEHHHSGFHRQAHGVKKSKKLSKVVK
MNYPTAGADLEPSRSKGFKGKVSEAGYLRDVDVKMTEQISDVMKPPAASGERKRKGMANL
ETHVHDNSELHEINENANDSFRLTESERLASKSGHAIQDSNGDFGGTERVSGSSGSKKTK
GRVEVPSLDEHSEHVPSGPKMADNISGSKKKSKKKPESTTDAVTVAEPAADVPEDNVVAV
EPEKIEKPKKKYVPISPTIHTGFSFSVVHLLTAVKKAMVSPAEDTPAAAKQPDGEDGKKW
FNNEEQNKTPQEQSMTEQAQQVLDGADASAAEQNVPSNSLALTVQEIVNRIRSNPGDPRI
LETQEPLQDLVRGVLKVLSSRTAPLGAKSWKALVAYEKSNKSWFWVGPVPSVSSYDDPDE
ETSAEAWCIPHKMLVKLVDAFSNWLKSGQETLKQIGSLPPPPPPNPANLDLKERFKELRA
QKSLNTISPSSDEARAYFQREEFLRYSIPDRAFCYTAADGEKSIVAPLRRGGGKPTAKAR
GHPMLLPDRPPHVTILCLVRDAASRLPARTGTRADVCTLLRDSQYLNHEEANKEAAINQV
VSGALDRLHYERDPCVLYDNDKKLWTYLHRGREEEDFEDDGTSSTKKWKRPRKDPSDPAE
PGAANDDFDDDGTGTPLANNAKKQKTDHGDPTVSGEANDEGDNATQNPSCGGLEGDPDLN
VPSSKNYEESVGVVYIDARPDDAGSNSVDAKPGSRADDNPASWQSVPEQNKNSTALPENT
SMDATLS
NT seq
3984 nt
NT seq
+upstream
nt +downstream
nt
atggcgatcgtgaggaccggcgccggcgtccggctcccgaggcttgacggcggcggggag
ggctcgccggaggccacggaggacgacgaggagtcgcgggccacgccgtcgcaggagtcc
ggggccgacggcttctccggcggcgaggaggaggagggggaggaggaggaggaggagaat
ggcggcggaggtgaggaaccagaggaggcggaggatgagttaggcgaggaggagttggag
ctggaggaggaggaagaggagggggactcggggatgggttccgacgagctggaggtcacg
gagctcggggagcctggcgccgagatgtgccaggttggggaccagagcgttgccgtgccg
ctggagctctacgacctcgccggcctcagtgatgtgctttcgctcgacgcctggaacacc
ctccttagcgaggacgagcgaatccgtctcgccgccttgctgcccgacatggaccaggag
acctttgcccgcaccctagttgagctcctctcaggacagaacttccactttgggagcccc
ctcgccgccctcttcaagcagctcaaaggggggctgtgcgaccccagggtcaacctgtac
cgccgtggcacccgctttgcggagcggcgcaagcattactactggctgcagagctaccac
aactcaatggtgcggggtctgtgggagatcaaggattgctggaagggccgtgaggggtac
agccttgatgagaggctgaggatgttggatgctttgaaggcaaagcagcagcagagaaaa
gctttggctttggcttggcgatctgggtcagagactgattcggggagcagggagtctggg
aaacaggtcttaaatcagctgaagctagataagattggacagaagaaggcagggaagtta
gcgaaggagaggtctaaaggcttgctgcgggtgaatatgctgaaaggagttgatgaagag
tatggggaagggtctggccgtgatgctgcagtagcgctttctcgtcaagacaatgtgtat
ggatatgattcgggcacacatagagggaagcttcataggagcatagatggcctttactcg
gaggagctaggatatgaacgggattcgtccagaactcggtttccgaggctgctgccgaag
ccagtaaagaagaaggaattgactacgagctatgatggcaatctgtacggaaacaactac
catgataacaataatgcttctccatactactatggcaggaatcccggtcctaatcaggga
gtcactctagcagcagcatatgatcctccatattttgacaccagaaggaatgcaaggtac
tcggagagggactgggtacagggtggaaaaggtgtgcagagtaaagcactaacaggggat
gaaatgcactggactgctagtacccacactggccaagtagatgactggcaaaaagggaag
ttggcaggtgattacaggagcaggaaagatcaagctggctatggtctgaaggttaagtcc
tataaaagcatcgagcaacagactaatgatgctcgcattgggtcagaccctagaagcaag
atatcacaggtgaagatggcaggtaaatccagtagccaatttgataggattagccagaaa
cactccaggggcaatgctgcctattctcaaagtgaggagacagaatctgattcatcagaa
cagtttgaagatagtggggacgtgcattttcttgaacggaagccagagcatcaccattct
ggatttcatagacaagcacatggtgtcaaaaagtcaaaaaaactttctaaagtggtcaaa
atgaactatcctactgctggtgcagatttagaaccctctcggagcaaaggattcaaagga
aaggtttcagaggctggttatttacgtgatgtggatgtgaagatgacggaacagattagt
gatgtcatgaaacctccagcagccagtggtgaaaggaagcggaaagggatggcaaatttg
gaaacacatgttcatgataactccgaactgcatgaaatcaatgaaaatgccaatgattca
ttcaggctaacagaaagtgaaaggcttgccagtaaatcaggccatgcaatccaagattct
aatggtgattttggtggtactgaaagagtaagtggtagctctgggtccaaaaaaacaaaa
ggaagagttgaagttcctagcctggatgagcacagtgagcatgtgccatctggtccaaaa
atggccgacaacatcagtggctcgaagaagaaaagcaaaaagaagccagagagcaccaca
gacgcagttactgtagcagaaccagctgctgatgtgccggaagataatgtagtagcagta
gagcctgagaagattgagaagcccaagaagaagtatgtaccaatatcaccaactatccat
accggcttttcattctccgttgtacatcttttaactgctgtaaagaaggctatggtctct
cctgctgaggatactccagcagcagcgaagcaacctgatggagaggacggcaaaaaatgg
ttcaacaatgaagagcaaaacaaaacgcctcaagaacaaagtatgacagaacaagctcaa
caggttcttgatggtgcagatgccagtgccgcagagcagaatgtaccaagcaattcacta
gcacttactgttcaagagatcgtcaatcgaattagatcaaatcctggagatcctaggata
cttgaaacccaggagcccctccaggatttagttcgaggagtattgaaggtactgtcatct
agaacagctcctctaggtgcaaagagctggaaagcactagttgcctatgaaaagtcaaac
aaaagttggttctgggttggtccagtaccttctgtttcatcatatgatgatcctgatgaa
gaaacttctgcagaagcatggtgtataccgcacaagatgcttgtgaagttggttgatgca
ttttctaattggctgaaaagtggtcaggaaaccctcaagcagataggatcccttccacca
cctccaccaccaaatcctgcaaacttggatttgaaggaaagattcaaggagcttagagcc
cagaaaagtcttaacacaataagcccaagctcagacgaagcaagggcatatttccagcgt
gaggaatttttgaggtactccatacctgatagagccttttgctatactgctgctgatggg
gagaagtctatagttgctcccttgagaagaggaggtggaaagcccactgctaaagctagg
ggtcaccccatgctcttacctgatcgtccgccacatgttactatcctctgtcttgtaaga
gatgctgcttctaggttgcctgcaagaactggaactagagctgatgtctgcacactactc
agagattcacaatacctaaaccatgaagaagccaataaagaggctgctattaatcaagtc
gtcagcggtgctcttgatcgcttgcactatgaacgtgatccttgcgtactgtatgataat
gacaaaaaattgtggacctatctacacaggggtagggaggaggaagattttgaggatgat
ggcacgtcatctacgaaaaaatggaagagaccgaggaaagatccctctgatccggcagag
ccaggtgcagcaaacgatgattttgatgatgatggcactggcacccctttggcgaacaat
gcaaaaaagcaaaagacagaccatggcgatcctacagtatcaggagaagctaacgatgag
ggagataatgcaactcagaatccatcttgtggtggcctcgagggtgatcctgatcttaat
gttccatcatcaaaaaattacgaagaatcagttggagttgtttacattgatgcaagacca
gatgatgctggttcgaattcagtagatgcaaaaccaggcagcagggctgatgataaccca
gcaagttggcagtcagtcccagaacagaataaaaacagcacggcacttcctgagaacacc
agcatggatgctaccctgtcatga
DBGET
integrated database retrieval system
