Panicum hallii (Hall's panicgrass): 112887274
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Entry
112887274 CDS
T07366
Name
(RefSeq) probable diaminopimelate decarboxylase, chloroplastic
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
phai
Panicum hallii (Hall's panicgrass)
Pathway
phai00300
Lysine biosynthesis
phai00470
D-Amino acid metabolism
phai01100
Metabolic pathways
phai01110
Biosynthesis of secondary metabolites
phai01230
Biosynthesis of amino acids
Module
phai_M00527
Lysine biosynthesis, DAP aminotransferase pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
phai00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
112887274
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
112887274
Enzymes [BR:
phai01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
112887274
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Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-GeneID:
112887274
NCBI-ProteinID:
XP_025809196
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All DBs
Position
3:61684772..61690832
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AA seq
491 aa
AA seq
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MVAANLLSRSLLPALNPSPSAHRNRGSAAAAVSFPRPRRHGRLSSVRASVSTASPSPPPQ
PAAAAAAPKHCFRRGADGYLYCEGVRVEDAMAAAARSPFYLYSKPQVLRNFAAYREALQG
LRSVVGYAVKANNNLPVLRLLRELGCGAVLVSGNELRLALQAGFDPTRCIFNGNGKTLED
LKLAAESGVFVNVDSEFDLENIVRAARATGKKVPVLLRINPDVDPQVHPYVATGNKTSKF
GIRNEKLQWFLDSIKSYSNDIKLVGVHCHLGSTITKVDIFRDAAILMVNFVDEIRAQGFE
LEYLNIGGGLGIDYHHTDAVLPAPMDLINTVRELVLSRDLTLIIEPGRSLIANTCCFVNR
VTGVKSNGTKNFIVVDGSMAELIRPSLYGAYQHIELVSPPSPGAEVATFDIVGPVCESAD
FLGKDRELPTPDEGAGLVVHDAGAYCMSMASTYNLKLRPPEYWVEEDGSIVKIRHEEQLD
DYMKFFDGLPA
NT seq
1476 nt
NT seq
+upstream
nt +downstream
nt
atggtggcggcgaacctgctctcccgctccctcctccccgccctaaaccctagcccgtcc
gcccaccggaaccgcggtagcgccgcggccgccgtctccttcccccgcccccgccgccac
ggccgcctgtcctccgtgcgcgcctccgtctccacggcctccccgtccccgccgccgcag
ccagcggcggcggcggcggcgccgaagcactgcttccgccgcggcgccgacggctacctg
tactgcgagggggtgcgggtggaggacgcgatggcggcggcggcgcggagccccttctac
ctctacagcaagccgcaggtcctccgcaacttcgccgcctaccgcgaggcgctccagggg
ctccgctccgtcgtggggtacgccgtgaaggccaacaacaacctccccgtgctgcgcctc
ctgcgcgagctcggttgcggcgccgtgctcgtcagtggcaacgagctccggctcgcgctc
caagcgggattcgaccccaccaggtgtatatttaatggaaatgggaagacattggaagat
ctcaaattagctgctgagagcggggtatttgtaaatgtggatagcgaatttgatttagag
aatattgtcagagctgcaagggctacaggaaagaaagtgcctgttttgcttagaataaat
ccagatgtggatccgcaggtacatccgtatgttgccactggaaataaaacttccaaattc
gggatccgcaatgagaaattgcaatggtttctggactctatcaagtcatactcgaatgat
atcaaattggttggtgttcattgtcatctggggtctactattacaaaggttgatatattt
agagatgctgcaattcttatggtgaattttgttgatgaaattcgagcacaaggttttgag
ttggagtacctgaacattggaggtggtttgggaatagattaccaccacactgatgcagtc
ttgcctgcacctatggatctcatcaacactgtgcgagaattagttctctctcgagatctt
actcttatcattgaacctggaagatccttgattgctaatacttgctgcttcgtcaataga
gtaactggtgttaaatctaacggtacaaagaatttcattgttgttgatggcagcatggca
gaactcatcagacctagtctgtatggagcataccagcatatcgaactggtctctcccccc
tctcctggtgctgaagtagcgacctttgatattgtcggaccagtttgtgagtctgcagat
ttccttggaaaagatagggagcttccaacaccagatgagggagctggactggttgttcat
gatgcaggtgcctactgcatgagcatggcttccacctacaacctgaagttgagaccgcca
gagtactgggtggaagaggacggttctatcgtaaagatcaggcatgaagagcagcttgat
gactacatgaagttctttgatggtcttcctgcttag
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