Panicum hallii (Hall's panicgrass): 112887337
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Entry
112887337 CDS
T07366
Name
(RefSeq) putative RNA polymerase II subunit B1 CTD phosphatase RPAP2 homolog isoform X1
KO
K20827
RNA polymerase II-associated protein 2 [EC:
3.1.3.16
]
Organism
phai
Panicum hallii (Hall's panicgrass)
Brite
KEGG Orthology (KO) [BR:
phai00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
phai01009
]
112887337
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
phai03021
]
112887337
Enzymes [BR:
phai01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.16 protein-serine/threonine phosphatase
112887337
Protein phosphatases and associated proteins [BR:
phai01009
]
HAD phosphatases
Fcp/Scp phosphatases
112887337
Transcription machinery [BR:
phai03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
112887337
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RPAP2_Rtr1
Motif
Other DBs
NCBI-GeneID:
112887337
NCBI-ProteinID:
XP_025809266
LinkDB
All DBs
Position
3:complement(6892698..6896434)
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AA seq
739 aa
AA seq
DB search
MSSTPAAAGPAAAARTVASAVLRVQMALLDGAAASNEALLHAAASALLSRVDYDDVVTER
TIADACGNPACPNPLPAASAAGGPRFHISLREHRVYDLEEARRFCSERCLVASAALAASL
PADRPFGVPPERLDAVVALVEGAGAGEGHGLGFRDADGKKKDEGAKLEIKEKEVAGAGEV
TLQDWVGPSDAIEGYVPRRDRTAEGQKPAMQNKVAGNELSRIENVDCMNAAPGEDGMANT
SPSVEPHVSSEVIAEKMGNMILSENTKPPGKKTTKTPSKMLKQEEDNSMLSSCISDSIAK
QLEDVVLEEKRASKKTKASKASSRSQKSKSRKRPGGSDGHEVDFTSTIVIGDASTDMEQG
TMNQYNYLSSSILTDNYASSSQCAAKDSTQAYAEQLCREFSEAVSTGKDETSDEKMKPVL
KSSMKLPGSKNVMQSVTWADENGSVLETSKLYESPSSSIKQSEEGIDISLRRASAEACAA
ALIEAAEAISSGTSEVDDAVSKAGIIILPDMLHQKQYSNDKSSGGDEEPEIDRDVLKWPK
KTVLLDTDLFEVDDSWHDTPPEGFSLTLSGFATIWAALFGWISRSSLAYVYGLDGVSVEE
LLIAKGREYPEKIVLKDGHSGEIRRALDTCICNALPVLVSNLRLQIPVSKLEITLGYLID
TMSFFDPLPSLRSRQWQVVVLVLLDALSIHRLPALAPVVSNSKLVQKMLNAAQVSREEYD
SMVDLFLPFGRFIRTPMPI
NT seq
2220 nt
NT seq
+upstream
nt +downstream
nt
atgagctccacgcccgccgccgcgggtccggcggcggcggcgcggacggtggcctcggca
gtgctccgcgtccagatggcgcttctcgacggcgccgctgcctccaacgaggccctcctc
cacgctgccgcgtccgcgctgctctcccgcgtcgattacgacgacgtcgtcaccgagcgc
accatcgccgacgcctgcggcaaccccgcgtgccccaacccgctccccgcggcctccgcg
gccggcgggccccggttccacatctccctccgcgagcaccgcgtctacgacctcgaggag
gcgcgcaggttctgctccgagcgctgcctcgtcgcctcagcggccctggcggcgtcgctc
ccggccgatcgccccttcggggtcccgcccgagcggctcgacgccgtggtcgcgctcgtc
gagggcgccggcgccggggaggggcacggcctagggtttcgggatgcggatgggaagaag
aaggacgaaggggcgaagctggagatcaaggagaaggaggtcgctggggcaggggaggtc
acgctgcaggactgggttgggccctcggatgccatcgaggggtatgtcccgcgccgcgac
cgcacggccgaagggcaaaagccagctatgcagaacaaagttgctggaaatgagctgtcc
agaatcgagaatgtggattgtatgaatgctgctcctggtgaagatggcatggcaaataca
tctccatcggttgaaccacatgtgagctcagaagtaatagctgagaagatgggcaacatg
attcttagtgaaaatacgaagccacctggaaagaagacaactaaaaccccatcgaagatg
ctgaagcaggaggaagataacagtatgttgtcatcttgcatatctgattccattgcaaag
cagctggaggatgtagttctggaagagaaaagggctagtaagaaaacaaaagcaagtaaa
gcatcatcaaggtcacagaagagtaagtctagaaaaaggcctggtggaagtgatgggcat
gaggtggactttacaagtacaatcgttattggggatgcttcgacagatatggagcaaggg
acgatgaatcagtataactacttgtcaagttctatattgacagacaattacgcctcatca
tctcagtgtgcagcaaaagattcaacacaagcttacgctgaacagctatgcagagaattt
agtgaagcagtgagcactggaaaagatgagacaagtgatgagaagatgaaacctgtacta
aagtcttcaatgaagcttcctgggtctaagaacgttatgcagtctgtgacatgggcggat
gagaatggaagtgttctagaaacaagcaaactatatgaaagcccttcaagtagtataaaa
cagtctgaggaaggcatagacatttcactaaggcgtgcatctgcagaggcttgtgccgct
gcacttattgaggcggcagaagctatttcttcagggacatcagaagtagatgatgcagtt
tcaaaggctggaatcatcatattgcctgacatgcttcaccagaaacaatacagcaatgac
aaaagcagtggcggagatgaagaacctgaaattgatagggatgtcttgaagtggcctaag
aagactgtgcttctggatacagacttgtttgaggtcgatgattcttggcatgacacgcct
ccagaaggtttcagtctaacactgtccggtttcgcaacaatatgggctgcactattcgga
tggatctcccggtcatctttggcttatgtgtatgggcttgatggggtttccgtggaagag
ttgttgattgccaaagggagggaatatcctgagaagatagttttgaaagatgggcactca
ggggaaataagaagagctctagacacatgtatttgcaatgccctgccagtacttgtatca
aacttgaggttgcagatcccggtttcaaagttggagattactctgggctacttgattgac
acgatgtcattttttgacccgcttccttctctgcgatcaaggcagtggcaagtggtggtt
ctggtactgcttgatgctctctccattcaccggcttcctgcccttgctcctgtcgtctca
aattcaaagcttgtgcaaaagatgctgaacgccgctcaggttagcagagaggagtacgac
tcgatggttgatctcttcctcccttttggaagattcattcggacacccatgccgatatag
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