Panicum hallii (Hall's panicgrass): 112887445
Help
Entry
112887445 CDS
T07366
Name
(RefSeq) RNA polymerase sigma factor sigC-like
KO
K03093
RNA polymerase sigma-I factor
Organism
phai
Panicum hallii (Hall's panicgrass)
Brite
KEGG Orthology (KO) [BR:
phai00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
phai03021
]
112887445
Transcription machinery [BR:
phai03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
112887445
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r3
Sigma70_r2
Motif
Other DBs
NCBI-GeneID:
112887445
NCBI-ProteinID:
XP_025809405
LinkDB
All DBs
Position
3:complement(10106535..10109497)
Genome browser
AA seq
566 aa
AA seq
DB search
MGLQMMQGRPCASCYPSSSSSSSSWMMAAHPPKQPPHPLGGRSISSESLAALALHLVLKR
RKYHGRDIATAFASSSSVLQITENKSSSLTKPKAERKVLDDALDRNLQYDWMDEETLFWL
DRNYTNSNLQYDLLMENLQALETSLAGKDLKMLEKDILVHIEQLGALGSFNASMSRATLD
TLTQTSHEPDFSLLDKVIKFDPETPLKEQDAEVIVRSGKSQERKQKRMRASEKASRISVK
VNPRRSKKSRKYSSSQFISEWKNYPGRRRTIVREQSSSLVTIKECANLEKIREDMIKEGQ
EVSYQRWAEEAGVDEAELKRRLQAGYCCRERLIVTTEWLVRYIARTYTGMGTAFDDLLQA
GKMGVLDGAEKFDSRKGCKFSTYVKYWIRKGMLALLAENSGVTLLPARMECIIRKVKEAR
RAIRYSQGRNPSDSEIAAVIGVSVANVRLARKCSRRVQSLYSEIGIGQNAKFTEVIPDAS
LEAADEAIFRAQLRERLLVVLDRLPAREGHVLKLRHGLEDGRCMSLEQIGRIYRVSKEWI
RKIEKSAMAKLRNQDVRRELDDFCSF
NT seq
1701 nt
NT seq
+upstream
nt +downstream
nt
atgggtctgcagatgatgcaaggcaggccctgcgcctcgtgctatccatcgtcctcgtcg
tcttcctcctcgtggatgatggcggcccatcccccgaaacagcctcctcatccattgggg
ggaaggtcaatttcttctgaatcccttgcagcactggccttgcatctcgtgctaaaacgc
cgcaaataccatggccgggacattgcgaccgcttttgcatcttcatccagtgtgcttcag
atcacagagaacaagtcaagtagcttgacgaaacccaaggcagaaaggaaggtccttgat
gacgctcttgacagaaatttacagtatgactggatggatgaagagacgttattctggctg
gataggaattacacaaatagcaatctacagtatgacttgttaatggaaaaccttcaagca
ttggagactagtttggctggcaaagacttgaaaatgctggaaaaggatatccttgtacat
attgaacagcttggagctctgggatcgtttaacgcgtctatgtccagggccaccctagac
accctaacacagacctcacatgaaccagatttctctctgcttgacaaagtcatcaagttt
gacccagagactcctctgaaggagcaagatgctgaagtaatcgttcggagtggcaagagt
caagagaggaaacagaaaagaatgagagcatcagaaaaggcctccaggatctctgtgaag
gtaaatccaagaagatcgaagaaatcgcgcaagtatagtagcagtcagtttatatccgag
tggaaaaattatccggggcggagaaggaccattgtacgtgaacaatcatcatcgttagtt
accatcaaggaatgtgcaaaccttgagaagatcagagaggacatgataaaggaggggcag
gaggtgagctatcagaggtgggcagaggaagctggagttgatgaggcagagctgaagagg
aggctacaggcaggttactgctgccgagagaggttgatagtgaccaccgagtggctcgtc
cggtacatcgcaagaacatacaccggaatgggaacggctttcgacgatctacttcaggct
gggaagatgggcgtccttgatggcgccgagaagttcgacagccggaaggggtgcaagttc
tccacgtacgtcaagtactggatcaggaaagggatgctagctctcctggccgaaaattca
ggagtcaccttgctgccggcaagaatggagtgcatcatccgcaaggtgaaggaggcgcgg
cgcgcgatccggtacagccaagggaggaacccatcggattcagagatcgccgccgtgatc
ggcgtgtccgtggccaacgtcaggctggcgcgcaagtgctctcgcagggtccagtcactc
tactcggagatcgggatcgggcagaatgcaaagttcacggaggtgatcccggacgcgtct
ctggaggctgccgacgaggccatcttccgggcgcagctgagggagaggctgctggtggtg
ctggacaggctgccggcgcgggaagggcacgtgctgaagctgcggcacgggctggaggac
ggcaggtgcatgtcgctggagcagatcggccgcatctaccgcgtgtccaaggagtggatc
aggaagatcgagaagtcggccatggccaagctcaggaaccaggacgtgcgccgcgagctc
gacgacttctgcagcttctag
DBGET
integrated database retrieval system
