Panicum hallii (Hall's panicgrass): 112887475
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Entry
112887475 CDS
T07366
Name
(RefSeq) protein SUPPRESSOR OF PHYA-105 1-like
KO
K16240
protein suppressor of PHYA-105 1 and protein SPA1-related 2
Organism
phai
Panicum hallii (Hall's panicgrass)
Pathway
phai04712
Circadian rhythm - plant
Brite
KEGG Orthology (KO) [BR:
phai00001
]
09150 Organismal Systems
09159 Environmental adaptation
04712 Circadian rhythm - plant
112887475
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
phai04121
]
112887475
Ubiquitin system [BR:
phai04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Multi subunit type E3 associated proteins
112887475
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_CDC20-Fz
WD40
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_RIG_2nd
Beta-prop_TEP1_2nd
WDR55
Beta-prop_TEP1_C
Beta-prop_EIPR1
EIF3I
Beta-prop_WDR19_1st
Beta-prop_CAF1B_HIR1
Pkinase
Beta-prop_WDR90_POC16_2nd
ANAPC4_WD40
WD40_MABP1-WDR62_2nd
Beta-prop_DCAF4
Beta-prop_EML
Beta-prop_WDR35_TULP_N
WD40_MABP1-WDR62_1st
WD40_like
WD40_RFWD3
WDR90_beta-prop_4th
PK_Tyr_Ser-Thr
Motif
Other DBs
NCBI-GeneID:
112887475
NCBI-ProteinID:
XP_025809436
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All DBs
Position
3:11529280..11537695
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AA seq
1131 aa
AA seq
DB search
MEGTTAAEVGGAGDGAAGDVQIKGSKENGQPAEQQQHQQPSGSEALEMPATPLPRDMDWS
EHFSFFTSLGGFGGSSDGARGLTSVGLSNSELRPDSVTQRGLDHEAEERVEELTLKNCIN
TDVQPEVSAGGSSSSGDRPTVIKGLWGNFTRMAWRTSELASRENAAVSYGDIANPRAGVA
SSRENLGMNLANNMISRNNDVSGKEIPTSRGGNVNNEFVMPFRNQQLLLSARPNQNEHRA
ERDNVIRVSSFSNRILEQMRSKTLTPPSGVLGSPLNGKSKGKGVAHQGAREEIQVQANAR
PRGRLDKIPTIPTSMYDSMTRVDPLPFSTGANVSKFHCDGTSLRELIKPGRQTLSRFEKM
HLFKQILDLVDKCHAQGYTLQHLRPSYFTIPSSNQVKYIGSYTTQDLPTSIRQEVTREDL
GNRKRSFGHKIEHQESNGHGNSMLKYQKVGEQGSVAVRRPTQTFWTDQRVDNQNEDVNPG
VLGQENFNCTVRERSKFVEPYGSYTSCAQHVSSSGNQQAAFELRNLEESWYISPEELSQF
KGTFPSNIYSLGVLLFELFCCSETWEVHCAAMSNLRQRILPPNFLSESPKEAGFCLWLLH
PDPCSRPKARDILGCDLINEGRDLSLLDQSPVSISEDDTESSLLLNFLSQLKEEKEMQAA
KLSADLGSLQTDITEVERRHSARMGFSLEDTDVLATSSALSGASVSAPQGALLSGLLPSL
CKSSIYEERVMRNLEQLENAYYSMRSTVDTCETNAIKRPDNEALRVRENFHQLHSDSGAT
DEQTDRLGCFFDGLCKYARHSRFEVRGILKNADILNSPNVICSLSFDRDEEYFAAAGVSK
KIKIFEFDALLNDRVDIHYPLIEMPSKSKLSCVCWNNYIKNYLASTDYDGTVQLWDASSG
QGFTQFTEHRKRAWSVSFSEVDPTKLASGSDDCCVKVWSINQKNCIDTIRNVANVCCVQF
SPYSSRMLAFGSADYKIYCYDLRNTRIPWCTISGHGKAVSYVRFLDPETLISASTDNTLK
IWDLNRTNCSGLSADSCSLTLSGHTNEKNFVGLSVHDGYITCGSETNEVFSYYKTFPMPI
TSHKFGSIDPITGQVTNEDNQQFVSSVCWRGKSNMVVAANSSGNIKVLELV
NT seq
3396 nt
NT seq
+upstream
nt +downstream
nt
atggaagggacgacggcggctgaggtgggcggcgccggcgacggcgcggccggggatgtg
cagattaagggcagcaaggagaatgggcagcccgcggagcagcagcagcatcagcagccg
tcgggcagcgaggcgctggagatgcccgccacgcccctcccgcgggacatggactggtcg
gagcatttctccttcttcacctcgttgggcgggttcggaggcagctcggacggcgcgagg
ggcctgacaagcgttggcctctccaattctgagttgaggccggacagtgtgacgcagcgc
ggtttggaccatgaggcggaagagagggtggaggagctcacattgaagaattgcataaac
actgatgttcaacctgaggtttcggctggtggaagctcaagcagtggggataggcctact
gtcattaagggcctgtggggtaactttacacggatggcatggagaactagcgagttggcc
agcagggagaatgcagcagtgagttatggcgacattgcaaacccgagggctggtgttgct
tcgagcagggaaaatttggggatgaaccttgccaacaatatgatctcacggaataacgac
gtgtccggcaaggagatacccacgagtcgaggtggcaatgtgaataatgagtttgtgatg
ccatttcgcaatcagcagcttctattatctgcaaggccgaatcagaatgaacatcgggct
gaaagggacaatgttattagagtaagcagcttctcaaatagaattcttgagcagatgagg
agtaagacattaacacctccatctggggttctaggatcaccgcttaatggcaaatcaaaa
ggtaaaggggttgctcaccaaggtgcacgggaggagatccaagtgcaagctaatgcaaga
cctagaggccgtttggacaagattccgactattcctacctcaatgtatgattctatgacc
agagtggatccgttgcctttcagtactggtgcaaatgtttcaaaatttcactgcgatgga
actagcctgagggaactgattaagcctggccggcaaacattgagcaggtttgagaaaatg
catttgtttaagcagatccttgatcttgtggataagtgtcatgcacagggttatacttta
caacatctgcgaccatcatattttacaattccatcttcaaaccaagttaagtatattggt
tcttatactacacaagatttgccaacatcaattagacaagaagtcactagagaagatctt
gggaatagaaaaaggagttttggccataaaattgagcaccaagagtctaacggacatgga
aattcaatgctgaagtatcaaaaggttggtgagcaaggctcagttgctgtcaggcgacca
acacagaccttttggactgaccaaagagtcgacaatcaaaatgaagatgtcaatccaggt
gttttagggcaagaaaattttaattgcactgtcagagaacgttctaagtttgtcgaacca
tatggcagttatacatcttgtgctcaacatgtttctagttctggcaaccaacaagcggca
tttgaattgaggaatctagaggaaagctggtacataagcccagaagagctcagtcaattt
aaaggcacattcccatcgaacatctacagccttggggttcttctatttgagctcttttgc
tgttctgagacatgggaggtgcactgtgctgcaatgtcaaatctccgccaacgcatcctg
cctccaaattttctttcagaaagtcctaaggaggctggcttctgcctttggttactgcac
ccagatccttgttcgagaccaaaagcaagagacattcttggatgtgacttgataaatgag
ggtcgggatttgtccttgttagatcagtcgccggtttccataagtgaagatgacactgaa
tctagtttgctacttaatttcctttctcaactgaaagaagaaaaggagatgcaggctgct
aagttatccgcagatcttggaagcttacaaacagacatcacagaggttgagagaagacac
tcagcaagaatgggatttagtttagaggacacagatgtactggcaacttctagtgctttg
tcaggagcttctgtgagtgcccctcaaggtgcgttgctgtcaggtttgctaccatcattg
tgtaagtcaagcatatatgaggagagggtaatgaggaatttggagcagcttgaaaatgct
tattactccatgagatctactgtggacacctgtgaaactaatgcaatcaaacgtccagat
aacgaggctttgagggtccgcgaaaatttccatcaacttcacagtgattctggtgctacg
gatgagcaaacggaccgccttggatgcttttttgatggtttatgcaaatatgcccggcac
agtaggtttgaggtacgaggaattttgaagaatgcagatatacttaactctccgaatgtc
atctgttcattgagtttcgatagggatgaagaatattttgctgctgctggagtttcaaag
aaaataaaaatatttgaattcgatgcactcctaaatgatcgtgttgatattcattacccg
ttgatagagatgcctagcaagtcaaagcttagctgtgtctgttggaacaactatataaag
aactacctggcatcaacagactatgatggcactgttcagttatgggatgccagctctggt
caaggattcacgcagtttacagagcatcggaaaagagcttggtctgtgagtttttctgaa
gtggaccctactaagttggcaagtggtagtgacgattgttgcgtgaaagtatggagtatt
aaccagaaaaattgcattgatacaatcagaaatgtggccaatgtatgctgtgttcaattc
tctccatactcctcccgcatgctagcttttggttcagctgattacaagatatactgttat
gatctgaggaacacaaggatcccttggtgtactatttcgggacatgggaaagctgtcagt
tacgtaaggttcttggatccagaaacacttatctctgcatcaacggacaacacattgaag
atatgggatcttaaccggactaattgcagtggattgtctgctgattcttgcagcctgaca
ctgagtggtcataccaacgagaagaattttgtagggttatctgttcatgatggatacata
acatgtggctccgaaaccaatgaagtattttcatactacaaaaccttccctatgccaata
acttctcataaatttggttctattgacccgataactggacaagtgacaaatgaagacaac
cagcaatttgtgtccagtgtatgctggagagggaagtcaaacatggtagtggctgccaac
tctagtggcaacatcaaagtgcttgagcttgtgtga
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