KEGG   Panicum hallii (Hall's panicgrass): 112887481
Entry
112887481         CDS       T07366                                 
Name
(RefSeq) histone deacetylase 2-like isoform X1
  KO
K11418  histone deacetylase 11 [EC:3.5.1.98]
Organism
phai  Panicum hallii (Hall's panicgrass)
Brite
KEGG Orthology (KO) [BR:phai00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:phai03036]
    112887481
Enzymes [BR:phai01000]
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.1  In linear amides
    3.5.1.98  histone deacetylase
     112887481
Chromosome and associated proteins [BR:phai03036]
 Eukaryotic type
  Histone modification proteins
   HDACs (histone deacetylases)
    Class IV HDACs
     112887481
SSDB
Motif
Pfam: Hist_deacetyl CH
Other DBs
NCBI-GeneID: 112887481
NCBI-ProteinID: XP_025809445
LinkDB
Position
1:6333407..6340731
AA seq 357 aa
MASASGSGAPEGPEALRRRRILSSRLYLDDVPSSSSKAPVVYSPAYDISFNGMEKQHPFD
SSKWGRVRNSLEDAGLLQSDRIVEPLEASEDDLLVVHSESYLNSLESSEKVARIVEVPAV
ALLPNLLVQQKLLYPFRKQVGGSVLSAKLALEKGWAINIGGGFHHCSAQEGGGFCAYADI
SLCINFAFIRLNISRVMIIDLDAHQGNGHEKDFGSDGRVYTLDMYNSGIYPFDHVAKKYI
DQKVELDSGTKTEDYLENLDKALKVAQSRFRPQLIVYNAGTDILHGDPLGRLKVSPEGVA
IRDEQVFRFAKDQNIPILMLTSGGYMKSSGRVIADSIINLSKKNLIDIVNLFSLEVI
NT seq 1074 nt   +upstreamnt  +downstreamnt
atggcgtcggcgtcgggttcgggggctccagaggggccggaggcgctccgccgccgccgc
atcctctccagccggctctacctcgacgacgtcccgagctccagctccaaggcgcccgtg
gtctactcgccggcgtacgacatctcgttcaacgggatggagaagcagcacccgtttgat
tcgtcgaagtggggccgcgtgcgcaactcccttgaggacgcggggctcctccagagcgac
cggatcgtcgagccgctggaggcctcggaggatgatctgctcgtggtgcactcggagtca
tacttgaacagccttgagagcagcgagaaggttgcccgcattgtagaggttccagcagtg
gcgctgctccctaacttgcttgttcagcaaaaacttctttatccattccggaagcaggtg
ggtggctctgttttatcagccaaactcgcactagaaaagggatgggctataaacattgga
ggaggcttccatcactgttcggcgcaggaagggggtggattttgtgcatatgctgatatt
tccctgtgcatcaattttgctttcattcgtttaaatatctcaagagtaatgatcattgat
ctagatgctcaccaaggaaatggtcatgaaaaagacttcggcagtgatggaagggtttac
actttggacatgtacaattctggaatatatccttttgatcatgtggctaagaagtacatt
gatcaaaaggtcgagctagatagtgggacaaaaacagaagattatttggagaatcttgat
aaggctctcaaggtagcacaaagtagatttcggccccagttgattgtgtataatgctgga
actgatatcctacatggtgatcctttaggcagactaaaggttagtccagagggtgtggct
attagagacgaacaggtttttagatttgcaaaagatcagaatattcctatcctcatgctg
acatcaggaggttatatgaagtcgagcggtcgagttatagcagattcgattatcaaccta
tcgaaaaaaaacctgatagatatagtgaatctatttagtctcgaagttatttag

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