Panicum hallii (Hall's panicgrass): 112887531
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Entry
112887531 CDS
T07366
Name
(RefSeq) RNA polymerase II C-terminal domain phosphatase-like 4 isoform X1
KO
K18999
RNA polymerase II C-terminal domain phosphatase-like 3/4 [EC:
3.1.3.16
]
Organism
phai
Panicum hallii (Hall's panicgrass)
Brite
KEGG Orthology (KO) [BR:
phai00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
phai01009
]
112887531
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
phai03021
]
112887531
Enzymes [BR:
phai01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.16 protein-serine/threonine phosphatase
112887531
Protein phosphatases and associated proteins [BR:
phai01009
]
HAD phosphatases
Fcp/Scp phosphatases
112887531
Transcription machinery [BR:
phai03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
112887531
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
NIF
BRCT
PTCB-BRCT
SARG
Motif
Other DBs
NCBI-GeneID:
112887531
NCBI-ProteinID:
XP_025809504
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Position
3:complement(20105746..20112787)
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AA seq
577 aa
AA seq
DB search
MSLAEAPSSSPSSSSGSEDFAALLDAELELASGADSAFPGDPSSPSPATDDEGEEEDSEE
EVEVEVLEQNGAKRRRVEEQRQDHGMSISPDKFATGPSKNVQVELCPHPGYFGGLCFRCG
KPQDEEDVSGVAFGYIHKGLRLGTSEIDRLRGADLKNLLRERKLVLILDLDHTLINSTKL
QDISSAENELGIRTAALKDDPDRSIFTIDSMQMLTKLRPFVHKFLKEASIMFEMYIYTMG
DKAYAIEIAKLLDPTNVYFPSKVISNSDCTQRHQKGLDVILGAESVAVILDDTEYVWQKH
KENLILMERYHYFASSCRQFGFGVRSLSESMQDERESDGALATVLDVLKRIHAIFFDTAA
ETDLSSQDVRQVIKTVRKEVLKGCKLVFSRVFPNNARPQEQMMWKMAEHLGAVCSTDVDS
TVTHVVAVDLGTEKARWAVGNKKFLVHPRWIEAANFRWHRQPEEDFHVIPPKEKSRDKVN
AVCGQKETSKDKEENAVAGEKETSNDRKEENDVAGQKETSNDHDGNDVDGQKKDDAKENA
VACRFVGTDRGDCFFYPLVQVQDVKFKSGPREISLLT
NT seq
1734 nt
NT seq
+upstream
nt +downstream
nt
atgagcctcgctgaagcgccgtcgtcatccccatcgtcgtcgagcggaagcgaagacttc
gccgccctcctcgacgccgagctcgagctcgcctccggcgccgactccgccttccccggt
gacccctcctccccctcgcccgccaccgacgacgagggcgaggaggaggattcagaggag
gaggtggaagttgaagtcctagagcagaacggtgccaaaaggcgtagagtggaggaacaa
cgccaagatcatggaatgtcaatttcgcctgacaaatttgccacaggtccatctaaaaat
gttcaagttgagttatgtccacatcctggatattttggtggactttgctttagatgtggc
aagccacaagatgaggaagatgtttcaggagttgcttttggttacatccacaagggcttg
aggctaggtacttcagaaatcgacagattacgtggcgctgatttgaagaatctgctgcgt
gaaagaaagttagtgcttattttagacctggatcatacactgatcaactcgaccaaactc
caagatatttcttctgctgaaaatgagttgggtattcggacagctgccctaaaagatgat
ccggacagaagcatcttcacgatagattcaatgcagatgctgacaaagttgagaccattt
gtccataaatttttgaaagaagcaagcattatgtttgaaatgtatatatacaccatgggt
gacaaagcttatgcaattgaaatagcaaagcttcttgaccctactaatgtctattttcct
tcaaaagtgatttcgaactcggattgcactcagcgacaccagaaaggtcttgatgtgatt
cttggggctgaaagtgttgcggtgattcttgatgacactgaatatgtctggcagaagcat
aaagaaaatctaattctgatggagagatatcattactttgcttcaagctgccgccagttt
ggttttggtgttagatctttgtcagagtctatgcaagatgaaagggagagtgatggtgct
ttggctacagttttagatgtcttgaagcgcatacatgcgattttctttgacacggctgct
gaaactgatctttcttcacaggatgtaagacaggtgatcaagacggtacggaaagaagta
ctgaaaggctgcaaactagtcttcagtcgggtgttcccgaacaacgctcgcccacaggag
cagatgatgtggaagatggccgagcatctgggcgccgtttgctctacagacgtggattcc
acagtgacccacgtggtggctgtggatctgggaacagagaaggcccgctgggctgtaggc
aacaagaagtttttggtccacccgcgctggattgaagccgccaatttccgatggcaccga
caaccggaggaagattttcatgtcattcccccgaaggaaaagagcagagataaagtgaat
gctgtgtgtggccagaaggaaacgagcaaagataaagaagaaaatgctgtagctggcgag
aaggaaacgagcaacgataggaaagaagaaaatgacgtagctggccagaaagaaacgagc
aacgatcatgatggaaatgatgtagacggccagaagaaggatgacgccaaagaaaacgcc
gtggcgtgcaggtttgtggggacggaccgcggggattgctttttttacccgctcgtgcag
gtccaggatgttaaatttaaatctggtccacgtgaaatttcgctgctgacctga
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