KEGG   Panicum hallii (Hall's panicgrass): 112887672
Entry
112887672         CDS       T07366                                 
Name
(RefSeq) aladin-like isoform X1
  KO
K14320  aladin
Organism
phai  Panicum hallii (Hall's panicgrass)
Pathway
phai03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:phai00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    112887672
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:phai03019]
    112887672
Messenger RNA biogenesis [BR:phai03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     112887672
SSDB
Motif
Pfam: Beta-prop_Aladin ANAPC4_WD40 Beta-prop_IFT122_1st Beta-prop_THOC3 WD40_WDHD1_1st WD40_CDC20-Fz Beta-prop_WDR19_1st Beta-prop_WDR5 Beta-prop_RIG_2nd Beta-prop_CAF1B_HIR1 Beta-prop_IFT140_1st WD40 Beta-prop_EML_2 WD40_Prp19 Beta-prop_WDR3_1st Beta-prop_WDR35_TULP_N Tricorn_2nd WD40_MABP1-WDR62_1st Beta-prop_WDR36-Utp21_2nd Beta-prop_HPS5
Other DBs
NCBI-GeneID: 112887672
NCBI-ProteinID: XP_025809701
LinkDB
Position
3:complement(934138..938608)
AA seq 442 aa
MPSFPPPGAVTVCEINRDLVAAEALSDDRAKDAYGDVLGMVFSPIPFQPDTLPPILEPPA
AEQPESTENVPTASVTSTISEFFKRMIFPPLNPNLLQEFDIQKISWNPHKHCLAFVSGKN
QVIVHDFEDSDAKEPFILTSDQHTNVKAVEWRPNSGKMIAVACKGGICLWSASYLGDVPF
MKAGVTPYSFSAFPRGYGGRWILVDVLRDSSAEQVTALCWKPDGRYLASASCNSPSFTIW
DVSQGLGTPIRRGLSNISLLRWSPSGDYLLAAKFDGTFHFWETNTWTSEPWSSSNGYVSG
ANWDPEGRVALVSFSNSTTLGSIHFSSKPPCLDAHLLPVELPEISSLIVSRGIEKLSWDA
SGERLALSFKDGNEMYRGLVAVYDVRRSPLVSVSLVGFIRGPGEGVKPLAFAFHNKFKQG
PLLSVCWSSGWCCTYPLILRSH
NT seq 1329 nt   +upstreamnt  +downstreamnt
atgccgagcttccctccgcccggcgccgtcaccgtctgcgagatcaaccgcgacctcgtt
gcggcggaggcactgtccgacgaccgcgccaaggacgcatacggcgatgtcctcggaatg
gtcttcagtcctatccctttccagccagacactcttccccccatcctcgagccccctgct
gcagagcaaccagagtctactgagaacgtgcccacagctagtgtgacttccaccatatcc
gagttcttcaaacggatgatcttccctccattaaatccaaatctgctacaagaatttgac
atccagaaaataagttggaatccgcacaagcattgtctagcatttgtgtctgggaagaac
caggttattgtacatgactttgaggattcagatgctaaagagccgttcattttgacaagt
gaccagcacaccaatgttaaggctgttgagtggagaccaaatagtggcaagatgattgca
gtcgcctgcaagggagggatatgcctctggtcagcatcatatcttggcgatgttccattc
atgaaagctggggtcaccccttattcctttagtgccttccctagaggttatggtggtcgg
tggatactggtggatgttcttcgtgactcttctgctgagcaagttaccgcgctttgttgg
aagcctgatggaagatacttggcatctgcctcctgtaatagtccatctttcacgatttgg
gatgtgtctcaagggttgggtactcctatacggcgtggattaagtaatatatcactactg
cggtggtcacctagtggagattatcttctagctgctaaatttgatggaacttttcacttc
tgggagacaaacacatggacttcagaaccttggtcttcatctaatggatatgtgtctgga
gcgaattgggacccagaaggtcgtgttgcattggtatccttttctaactctactacactt
ggctcaattcacttctcatctaagccaccatgtttagatgctcatcttctaccagttgaa
cttccagaaatttcctccctgattgtcagccgaggcatagaaaaattatcatgggatgct
tcaggggagcgtctggcattgtcgttcaaagatggaaatgaaatgtaccgtggtcttgtt
gctgtatatgacgtgaggagatctccacttgtctcagtatctctagttgggttcattaga
ggacctggagaaggagtgaaaccacttgcttttgcttttcataataaatttaagcaagga
cccttgctttctgtgtgctggagcagtggctggtgctgtacatatccactgatactccgt
tctcattaa

DBGET integrated database retrieval system