Panicum hallii (Hall's panicgrass): 112887672
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Entry
112887672 CDS
T07366
Name
(RefSeq) aladin-like isoform X1
KO
K14320
aladin
Organism
phai
Panicum hallii (Hall's panicgrass)
Pathway
phai03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
phai00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
112887672
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
phai03019
]
112887672
Messenger RNA biogenesis [BR:
phai03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
112887672
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Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_Aladin
ANAPC4_WD40
Beta-prop_IFT122_1st
Beta-prop_THOC3
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_WDR19_1st
Beta-prop_WDR5
Beta-prop_RIG_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_IFT140_1st
WD40
Beta-prop_EML_2
WD40_Prp19
Beta-prop_WDR3_1st
Beta-prop_WDR35_TULP_N
Tricorn_2nd
WD40_MABP1-WDR62_1st
Beta-prop_WDR36-Utp21_2nd
Beta-prop_HPS5
Motif
Other DBs
NCBI-GeneID:
112887672
NCBI-ProteinID:
XP_025809701
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Position
3:complement(934138..938608)
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AA seq
442 aa
AA seq
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MPSFPPPGAVTVCEINRDLVAAEALSDDRAKDAYGDVLGMVFSPIPFQPDTLPPILEPPA
AEQPESTENVPTASVTSTISEFFKRMIFPPLNPNLLQEFDIQKISWNPHKHCLAFVSGKN
QVIVHDFEDSDAKEPFILTSDQHTNVKAVEWRPNSGKMIAVACKGGICLWSASYLGDVPF
MKAGVTPYSFSAFPRGYGGRWILVDVLRDSSAEQVTALCWKPDGRYLASASCNSPSFTIW
DVSQGLGTPIRRGLSNISLLRWSPSGDYLLAAKFDGTFHFWETNTWTSEPWSSSNGYVSG
ANWDPEGRVALVSFSNSTTLGSIHFSSKPPCLDAHLLPVELPEISSLIVSRGIEKLSWDA
SGERLALSFKDGNEMYRGLVAVYDVRRSPLVSVSLVGFIRGPGEGVKPLAFAFHNKFKQG
PLLSVCWSSGWCCTYPLILRSH
NT seq
1329 nt
NT seq
+upstream
nt +downstream
nt
atgccgagcttccctccgcccggcgccgtcaccgtctgcgagatcaaccgcgacctcgtt
gcggcggaggcactgtccgacgaccgcgccaaggacgcatacggcgatgtcctcggaatg
gtcttcagtcctatccctttccagccagacactcttccccccatcctcgagccccctgct
gcagagcaaccagagtctactgagaacgtgcccacagctagtgtgacttccaccatatcc
gagttcttcaaacggatgatcttccctccattaaatccaaatctgctacaagaatttgac
atccagaaaataagttggaatccgcacaagcattgtctagcatttgtgtctgggaagaac
caggttattgtacatgactttgaggattcagatgctaaagagccgttcattttgacaagt
gaccagcacaccaatgttaaggctgttgagtggagaccaaatagtggcaagatgattgca
gtcgcctgcaagggagggatatgcctctggtcagcatcatatcttggcgatgttccattc
atgaaagctggggtcaccccttattcctttagtgccttccctagaggttatggtggtcgg
tggatactggtggatgttcttcgtgactcttctgctgagcaagttaccgcgctttgttgg
aagcctgatggaagatacttggcatctgcctcctgtaatagtccatctttcacgatttgg
gatgtgtctcaagggttgggtactcctatacggcgtggattaagtaatatatcactactg
cggtggtcacctagtggagattatcttctagctgctaaatttgatggaacttttcacttc
tgggagacaaacacatggacttcagaaccttggtcttcatctaatggatatgtgtctgga
gcgaattgggacccagaaggtcgtgttgcattggtatccttttctaactctactacactt
ggctcaattcacttctcatctaagccaccatgtttagatgctcatcttctaccagttgaa
cttccagaaatttcctccctgattgtcagccgaggcatagaaaaattatcatgggatgct
tcaggggagcgtctggcattgtcgttcaaagatggaaatgaaatgtaccgtggtcttgtt
gctgtatatgacgtgaggagatctccacttgtctcagtatctctagttgggttcattaga
ggacctggagaaggagtgaaaccacttgcttttgcttttcataataaatttaagcaagga
cccttgctttctgtgtgctggagcagtggctggtgctgtacatatccactgatactccgt
tctcattaa
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