Panicum hallii (Hall's panicgrass): 112887706
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Entry
112887706 CDS
T07366
Name
(RefSeq) serine/arginine-rich splicing factor RS2Z33-like
KO
K12896
serine/arginine-rich splicing factor 7
Organism
phai
Panicum hallii (Hall's panicgrass)
Pathway
phai03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
phai00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
112887706
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
phai03041
]
112887706
Spliceosome [BR:
phai03041
]
Common components
Common spliceosomal components
SR proteins
112887706
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
zf-CCHC
zf-CCHC_5
zf-CCHC_3
zf-CCHC_4
zf-CCHC_2
CLIP1_ZNF
RRM_5
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
112887706
NCBI-ProteinID:
XP_025809748
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All DBs
Position
3:complement(8442914..8445804)
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AA seq
256 aa
AA seq
DB search
MPRYDGRYDYDDRYDHYGRHGGNTKLFVGQISPHTQIHDLEDLFSKYGRLRKVDLKRDFG
FVEFSDPRDADDARYDLDGRKFDGSRIVVEFARGVPRGIGGVRQYGRGPPPGRCYNCGMD
GHWIRDCKAGDWRDRCYRCGEMGHVERKCQNSPKDLKRERRYSRSPSPRHGKGRGRSRSY
SRSPSPRHARGRSWTYSRSPQPRRDYSNAGGEELPSRSAHHSPNTRRNLPPREQAERNGS
YHGGSPRRGEAREKRR
NT seq
771 nt
NT seq
+upstream
nt +downstream
nt
atgcctcgatacgatggccgctatgattacgatgatcgatacgaccactatggtcgacat
ggtggtaacaccaagttgttcgtgggtcagatttctccacatactcagatacatgatctt
gaggaccttttcagcaaatatgggagactgcggaaagtggatctgaagagggactttggc
tttgttgagtttagtgatcctcgggatgccgatgacgcaaggtatgatcttgatggccga
aaatttgatgggagtcgcatcgttgttgagtttgcaagaggggtcccgcgtggtatagga
ggtgtccgtcaatatggcagaggacctcctcctggccgctgctataactgtgggatggat
gggcactggattcgtgattgcaaagctggtgactggagggataggtgctaccgttgtgga
gaaatgggtcatgtagaaagaaagtgccagaacagtccaaaggatctgaagcgagagaga
cgctactcaaggtctccatctcctcgccatggaaagggccgagggagaagcagaagctac
tcaaggtctccgtctcctcgtcatgcaaggggccgaagctggacttacagtaggtcgcca
cagccaaggagggattacagtaacgctggtggtgaagagttgccgtcaagaagcgcccat
cacagccccaacaccaggaggaacctcccaccaagggaacaagctgaacgcaatggctca
tatcatggtgggagccctagaagaggtgaagctcgtgagaagcgccggtga
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