Panicum hallii (Hall's panicgrass): 112888058
Help
Entry
112888058 CDS
T07366
Name
(RefSeq) probable rhamnogalacturonate lyase B isoform X1
KO
K18195
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
phai
Panicum hallii (Hall's panicgrass)
Brite
KEGG Orthology (KO) [BR:
phai00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
112888058
Enzymes [BR:
phai01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
112888058
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rhamnogal_lyase
CBM-like
fn3_3
EMC7_beta-sandw
Motif
Other DBs
NCBI-GeneID:
112888058
NCBI-ProteinID:
XP_025810178
LinkDB
All DBs
Position
3:9765425..9769036
Genome browser
AA seq
676 aa
AA seq
DB search
MAAAPRRCLQVAVGASLLVLLLAADPPPPPQAAGGGVTLHADDPTQVVVDNSVVQVSLSR
PQGQITGVRYSGGGGQNLLQYDAGQRNSGGYWDVVWNYPGSNRKGGTMDMLDGTEFQVVS
SSEEQVELSFRSSYNASRPNSLRLNVDKRLVMLRGSSGFYCYAIFEHTPEYPALNISVAR
LAFKLNAAMFNYMAISDDIQRYMPSAADREPPRGVPLAYKEAVLLVDPVEPEFRGEVDDK
YQYSMDNQDNTVHGWIGGGDGPAAAATGFWVVTPSNEFKNGGPLKRELTSHTGPTSLAVF
LGPHYVGRDMVIQFEEGEYWKKVLGPVFIYLNSGDPNCKRDLWEDAKARARAEISEWPYS
FPGSPDFAKACERGSVTGRLWVRDAAAKQQQPAAMAYVGLAAPDQPGSGSWARESKRYQF
WTRATSDGLFSIGNVREGVYNLYAWVPGVLGDYMHASPVTVTPACAVDAGDLVFEPPRSG
PTLWEIGVPDRSAAEFHIPDPDPRYASRLFLARDRYRQYGLWERYAALYPDSDLVFTVGE
SNHSRDWFFAHVTRKVAAGKDNTVEPTTWQIRFHLDGVVADGTYTLRIALAASHMASLQV
RVNDGGAPPAPAASLMGDNNAIARHGIRGTEWSLDFRIEGRLLSQGDNTIHITQASALNQ
LVGVMYDYIRLEGPST
NT seq
2031 nt
NT seq
+upstream
nt +downstream
nt
atggctgcggcaccgaggcggtgcctccaggtcgccgtgggagcgtctctgctggtgctg
ctcctcgccgccgacccgccgccgccgccgcaagcagccggtggcggcgtcaccttacac
gccgacgaccccacccaggtggtcgtggacaatagcgtggtgcaggtgtcgctgtccagg
ccgcagggccagatcaccggcgtccgctacagcggcggcggcggccagaacctcctgcag
tacgacgccggccagaggaactcgggagggtactgggatgtggtctggaactaccctggc
tcgaatcgcaaaggaggaacgatggatatgttggacggtacagagttccaggttgtatcc
tcaagtgaggagcaagtggagctttctttcaggagctcatacaacgcgtcacgtccgaac
agcctccggctaaacgtcgacaagaggcttgtgatgctgagaggcagctccgggttctac
tgctacgccatctttgagcacactccggagtacccagctctcaacatctcggtggctcgc
ctcgccttcaagctcaacgccgccatgttcaactacatggcgatctcggacgacatccag
aggtacatgccgagcgcggcggacagggagccgccccgcggcgtcccgctggcgtacaag
gaggccgtcctgctcgtcgaccccgtggagccggagttcagaggggaggtggacgacaag
taccagtactccatggacaaccaggacaacacggtgcacggatggatcggcggcggcgac
ggtccggcggcggcggccacgggcttctgggtcgtcacccccagcaacgagttcaagaac
ggcgggccgctcaagcgggagctcacctcgcacaccggccccacctccctcgcggtgttc
ctaggtccgcattacgtcggcagggacatggtgatccagttcgaagagggcgagtactgg
aagaaggtgctgggccccgtcttcatctacctcaactccggcgacccgaactgcaagaga
gacctctgggaggacgccaaggcgcgggcgcgagcggagatcagcgaatggccctacagc
ttccccgggtcgccggactttgcaaaggcgtgcgagagaggctccgtcacggggaggctc
tgggtccgagacgccgccgccaagcagcagcagcctgctgcgatggcctacgtcgggctc
gccgcgcctgaccaacctggctctggctcctgggccagagagagcaagaggtatcagttc
tggacgagggccacctccgacggcctcttcagcatcggcaacgtccgggaaggagtgtac
aacctctacgcctgggtccccggggtcctcggcgactacatgcacgcctcccccgtgacg
gtgacgccggcgtgcgccgtcgacgccggcgacctcgtgttcgagcccccgaggtcaggc
cccacgctgtgggagatcggcgtcccggaccggtcggcggcggagttccacatccccgat
cccgacccgaggtacgccagccggctcttcctcgccagggacaggtacaggcagtacggc
ctgtgggagaggtacgccgccctctaccccgacagcgacctcgtgttcaccgtcggcgag
agcaaccactccagggactggttcttcgcgcacgtcacgaggaaggtcgccgccggcaag
gacaacacggtcgagccgacgacgtggcagatacgcttccacctggacggcgtcgtggcg
gacggcacctacacgctgcggatcgccctcgcggcgtctcacatggccagcctgcaggtg
cgggtgaacgacggcggcgcgccgccggcgccagcggcgtcgctgatgggcgacaacaac
gccatcgcgcggcatggcatacgcggcacggagtggagcctggattttcgcatcgagggc
cgcctgctcagccaaggcgacaacaccatccacatcacccaggcgagcgccctgaaccag
ctcgtcggggtcatgtacgactacattcgcctcgaaggcccttccacgtag
DBGET
integrated database retrieval system
