Panicum hallii (Hall's panicgrass): 112888644
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Entry
112888644 CDS
T07366
Name
(RefSeq) N-glycosylase/DNA lyase OGG1
KO
K03660
N-glycosylase/DNA lyase [EC:3.2.2.-
4.2.99.18
]
Organism
phai
Panicum hallii (Hall's panicgrass)
Pathway
phai03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
phai00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
112888644
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
phai03400
]
112888644
Enzymes [BR:
phai01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
112888644
DNA repair and recombination proteins [BR:
phai03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
112888644
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OGG_N
HhH-GPD
RecR_HhH
HHH
Motif
Other DBs
NCBI-GeneID:
112888644
NCBI-ProteinID:
XP_025810708
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Position
1:complement(46881159..46885143)
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AA seq
416 aa
AA seq
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MRLPLLPRSPPLAAAVAAMPPRRRRVVRSLPLPPSPPKLSSTPPPAPPLEGPKPGTPDHD
DPPHSARRRLLPLAAAAVEAREEWHPLPLSAADLSLPLTLPTGQTFLWRRTSLSPLRFTG
AVGPHLVSLSHLPDADDGRLAFLLHNDGGCPASSSVPAARAALCGYLNAAVPLADLWRQF
AAADERFAEVAARLGGGGARVLRQDPVECVFQFLCSSNNNIKRIEKMVWTLAGYGERLGE
VGGFVFHRFPTIEQLARVSEQELREAGFGYRAKYIVGTAKELQAKPGGGEKWLASLREKE
LPEVIAALCTLPGVGPKVAACIALFSLDQNHAIPVDTHVWKVATQYLLPELAGKSLTPKL
SVVVADAFVTRFGSYAGWAQNVLFIGQLPAQKVVVAEVTSDDLTTKSPTKRKRGGN
NT seq
1251 nt
NT seq
+upstream
nt +downstream
nt
atgcgcctcccgcttcttccacggtcccctcccctcgccgccgctgtcgccgccatgcct
cctcgccgccgccgcgtcgtcagatcactgccgctcccgccttcccctccaaaactctcc
tctaccccgccgccggcccctcccctagagggacccaaacccggaacccccgaccacgac
gacccccctcactccgcccgtcgccgcctcctacccctcgccgccgcggccgtcgaggcg
cgggaagagtggcacccgctcccgctctccgcggccgacctctccctcccgctcacgctc
cccaccggccagaccttcctctggcgccgcacctccctctccccgctccgcttcaccggc
gccgtggggccgcacctcgtctccctttcccacctccccgacgccgacgacggccgcctc
gcctttctcctccacaacgacggcggctgccccgcctcctcctccgtgcccgccgcccgc
gccgcgctgtgcggctacctcaacgcggccgtcccgctcgccgatctctggcgccagttc
gccgccgccgacgagcgcttcgccgaggtcgccgcgcggctcgggggcggcggagcgcgg
gtgctcaggcaggaccccgtcgagtgcgtcttccagttcctgtgctcctccaacaacaac
atcaagcggatcgagaagatggtgtggacgctggcgggatacggggagcggctcggcgag
gttggcgggttcgtgttccaccggttccccacgatcgagcagctcgcgcgcgtgtcggag
caggagcttcgggaggccgggtttgggtacagggcaaagtacattgttggcactgctaaa
gaactgcaggccaaacctggtggaggtgaaaaatggcttgcctcattgcgtgagaaggaa
cttccagaggtgattgcggctctttgcactctgccaggtgttggtccaaaggttgctgcg
tgcattgctctgttctcccttgatcaaaatcatgctattcctgtcgatacacatgtctgg
aaggttgctacacaatatctattgccggagctagctggcaagagcctgaccccgaaactt
agtgttgttgtcgctgatgcatttgtaactagatttggaagctatgctggctgggcacag
aatgtgctcttcatcggccagctacctgctcaaaaggttgtggtggcagaagttaccagt
gatgatttaaccaccaaatctcctactaaaaggaagcgcgggggaaactga
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