Panicum hallii (Hall's panicgrass): 112888914
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Entry
112888914 CDS
T07366
Name
(RefSeq) protein argonaute 1D isoform X1
KO
K11593
eukaryotic translation initiation factor 2C
Organism
phai
Panicum hallii (Hall's panicgrass)
Brite
KEGG Orthology (KO) [BR:
phai00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
phai03019
]
112888914
03036 Chromosome and associated proteins [BR:
phai03036
]
112888914
Messenger RNA biogenesis [BR:
phai03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
112888914
Chromosome and associated proteins [BR:
phai03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
112888914
RNA interference (RNAi) pathway
RITS (RNA-induced transcriptional silencing) complex
112888914
microRNA pathway
RISC loading complex
112888914
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Piwi
ArgoN
PAZ
ArgoL1
ArgoL2
ArgoMid
Motif
Other DBs
NCBI-GeneID:
112888914
NCBI-ProteinID:
XP_025811089
LinkDB
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Position
4:complement(192586..201461)
Genome browser
AA seq
1064 aa
AA seq
DB search
MLQVCQPHCFIIPDMGSWRPRLPGFGEGSQAAEPSGGGRGPGRGFRGRGGSYHQQFPQSG
RGAGYYQHGQGAASQPRAAMVSQQWRPAGPAAGYLGHGQAYREVQPPQNYGGGRGGCGSG
PSAIAPELRQAMETSHEPDDISSPEAGSPELSPRASTVEVSDQLKGLSVQEKSNTGQEIV
QAFPVSHKSYKFPHRPGNGSIGTRCLVKANHFFAELPDKDLHQYDVSITPDVTSRIRSRS
VMEELVKLHKMSYLGGRLPAYDGRKSLYTAGPLPFTSKEFHITLLEEDDGSGVKRRQKTY
KVVIKFAARADLRRLEQFIAGRQAEAPQEALQVLDIVLRELPTARYAPFGRSFFSPDLGR
RRSLGEGIESWRGFYQSIRPTQMGLSLNIDMSATVFFEPLPVIDFVALLLNTDIRSRPLS
DAERVKIKKALRGVKVEVTHRGNMRRKYRIAGLTSQATRELTFPVDQGGIVKSVIQYFQE
TYGFAIQHTYLPCLQVGNQQRPNYLPMEVCKIVEGQRYSKRLNQSQIRALLEETCQRPHD
RERDIIQMVNHNSYHEDPYAKEFGIKISERLASVEARILPAPRLKYNETGREKDCLPRVG
QWNMMNKKMVNGGRVRSWICVNFARNVQESVASGFCRELARMCQASGMDFALDPILPPMY
AHPDQVERALKARFHDAMNMLGPQRKELDLLIGILPDNNGSLYGDLKRVCEIDLGIVSQC
CCAKQVFKMNKQILANLALKINVKVGGRNTVLVDAVSRRIPLVTDRPTIIFGADVTHPHP
GEDSSPSIAAVVASQDWPEVTKYAGLVSAQSHRQELIEDLYKVTHDPQRGTICGGMIREL
LISFKKSTGQKPQRILFYRDGVSEGQFYQVLLHELDAIRKACASLEANYQPQVTFIVVQK
RHHTRLFAHNHNDQNSVDRSGNILPGTVVDSKICHPTEFDFFLCSHAGIKGTSRPAHYHV
LWDENNFTADALQTLTNNLCYTYARCTRSVSIVPPAYYAHLAAFRARFYMEPDSSDSGSL
ASGARGGGAPSSSSTSRSTRAATGGAVRPLPALKDSVKSVMFYC
NT seq
3195 nt
NT seq
+upstream
nt +downstream
nt
atgcttcaagtttgtcagcctcactgtttcattatccccgacatgggatcgtggagacca
agactgcctgggtttggagagggctcacaggctgctgagcctagtggtggtgggagaggt
cctggaagaggttttcgtggccgtggtggctcctatcatcaacaattccctcaaagtggt
cgtggagctggctactaccagcacggacaaggtgctgcatctcaacctcgtgcagcaatg
gtgtctcagcagtggcgtcctgctggccctgctgcagggtatttgggccatggtcaggct
tacagagaagtgcagccaccacaaaactatggtggtggtagaggtggatgcgggtcaggc
ccgtccgccatagctcccgagctgcgccaagcaatggaaacttcacatgaaccagatgac
atctcctcaccagaagcaggctctccagagctatcaccacgtgcttctactgtggaagtc
tcagatcagctgaaaggtttgtctgtacaggagaaatcaaatacgggccaagagattgtg
caagcatttccagtgtcgcacaaatcatataagtttcctcaccgcccaggaaatggaagc
attggaaccaggtgtttggtgaaggcaaatcacttctttgctgaactgcctgacaaggat
cttcatcagtatgatgtttcaatcaccccagatgttacatcacgaattcggagccgttct
gtgatggaagagttggtgaagctgcacaagatgtcatacttgggaggtcggcttccagcc
tatgacggtagaaagagcctatacacggctggcccattgccattcacttcaaaagaattt
cacataactctacttgaggaagatgatggttctggcgtcaagaggcgtcagaaaacttac
aaggtagtcattaaatttgctgcaagagctgatctccgtcgtcttgagcaatttattgcc
ggaaggcaggcagaggctcctcaagaggctttgcaagttcttgacattgtcctgcgggag
cttccaacagcaagatatgcaccatttggtcgatcttttttctctcctgacctggggagg
aggcgatcccttggtgagggaatagaaagctggcgtgggttttaccagagcattcgtcct
actcagatgggcttgtcattgaacattgatatgtcggctactgttttctttgagccatta
cctgtgatagattttgttgcactgcttttaaatactgatatccgctcaaggcccctctca
gatgctgaacgtgtcaagatcaagaaggccttaagaggggtgaaggtggaagttacccac
cgtggtaacatgcggcggaagtatcgaatagctggtttaacatctcaggcaactcgagag
ctaactttccctgttgatcaaggaggcatagtgaagtctgttatacaatattttcaagag
acatatggttttgctatccagcatacctacctgccatgcctgcaggttggcaatcagcag
cgtccaaattaccttccaatggaggtctgcaaaatagtggagggacagaggtactccaaa
agattaaaccagagtcagataagagcccttttagaggagacatgtcaacgcccacatgat
cgggagcgtgacataattcagatggtgaatcataactcttaccatgaagatccttatgct
aaagagtttggcattaagatcagtgagcgtttggcttcagttgaggcacggattttacct
gctcctaggctcaaatataacgagactggcagagagaaggactgcttgccaagggttggg
cagtggaatatgatgaacaagaaaatggtaaatggtggtagagtcaggagctggatctgt
gtcaattttgctcgaaatgtgcaagagagtgttgctagtggattttgtcgtgaacttgct
cgcatgtgccaggcctcgggaatggactttgccttggatcctattcttccacctatgtat
gcacatcctgatcaagtggagcgagctctgaaagccagattccatgatgcaatgaacatg
cttggaccacagcgcaaggaacttgatttgcttataggaatacttcctgacaacaatggt
tctctttatggtgatttgaagcgtgtctgcgaaatagaccttgggatagtttcgcagtgc
tgctgtgcgaagcaagtttttaagatgaacaaacagatactggcaaatcttgctctgaag
ataaatgtcaaggttggaggaaggaacactgtacttgttgatgcagtgtcaagacgcatt
cctttggtgactgacaggcctaccatcatatttggtgcggatgtaacccatcctcatcct
ggtgaagatagcagcccttccattgctgctgttgtggcctcccaagattggcctgaggtg
acaaagtatgctggtttagtttctgcgcaatctcacaggcaagagctaatagaggatttg
tataaggtgacacatgatcctcagaggggaaccatctgtggcggcatgatcagggagctt
cttatatccttcaaaaagtcaactggtcaaaagcctcagcggatactattctacagggat
ggtgtgagtgaagggcagttttaccaagttctactgcatgagctggatgcaatccgaaag
gcgtgtgcatcgctggaagcaaattaccagccacaggtgacttttatcgtggtccagaaa
cggcaccatacaaggttgtttgcacacaaccacaatgatcagaattcagttgacaggagt
ggaaacatacttcctggtactgttgtggactcgaagatctgccatcctacagagtttgac
ttcttcctgtgcagccacgctggcatcaagggcacaagccgtcctgctcactaccatgtc
ctgtgggatgagaacaacttcacagctgatgcattgcagacccttaccaacaacctctgc
tacacttatgcgaggtgcacgcgctctgtatctattgtcccaccagcgtactacgctcat
ctggctgctttccgtgcccggttctacatggagcccgacagctcggacagcgggtcgctg
gcaagtggcgcccgtggaggcggggcgccgtccagctcgtcgacctcccgcagcacccgc
gcggccaccggcggagccgtcaggcccctccccgcgcttaaggacagcgtcaagagcgtc
atgttctactgctga
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