Panicum hallii (Hall's panicgrass): 112888979
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Entry
112888979 CDS
T07366
Name
(RefSeq) small nuclear ribonucleoprotein SmD3b-like
KO
K11088
small nuclear ribonucleoprotein D3
Organism
phai
Panicum hallii (Hall's panicgrass)
Pathway
phai03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
phai00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
112888979
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
phai03019
]
112888979
03041 Spliceosome [BR:
phai03041
]
112888979
03032 DNA replication proteins [BR:
phai03032
]
112888979
Messenger RNA biogenesis [BR:
phai03019
]
Eukaryotic type
mRNA processing factors
3' end processing
U7-dependent histone pre-mRNA processing factors
112888979
Spliceosome [BR:
phai03041
]
Complex A
U1 snRNP components
Sm proteins
112888979
U2 snRNP components
112888979
Complex B
U1 snRNP components
112888979
U4/U6.U5 tri-snRNP components
112888979
Complex C
U2 snRNP components
112888979
DNA replication proteins [BR:
phai03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (fungi)
Sm core complex
112888979
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
SM-ATX
DUF6897
Motif
Other DBs
NCBI-GeneID:
112888979
NCBI-ProteinID:
XP_025811213
LinkDB
All DBs
Position
1:complement(300547..302651)
Genome browser
AA seq
132 aa
AA seq
DB search
MSRSLGIPVKLLHEAAGHVVTVELKTGEVYRGAMVECEDNWNCQLDNITFTAKDGKVSQL
EHVFIRGSRVRFMIIPDMLKNAPMFKRLEARIRGKGSAVGVGRGRAVAMRARAAAGRGGG
PVGRGSAPPVRR
NT seq
399 nt
NT seq
+upstream
nt +downstream
nt
atgagccgcagcctcgggatccccgtgaagctgctgcacgaggcggcgggccacgtcgtc
acggtcgagctcaagaccggcgaggtctaccgcggcgccatggtcgagtgcgaggacaac
tggaactgccagctcgacaacatcaccttcacggcaaaggacggcaaggtttcgcagctg
gagcacgtcttcatcagggggagcagggtcaggttcatgatcatacccgacatgctcaag
aacgcccccatgttcaagcgcctcgaggccaggattaggggtaaaggctcagctgttggg
gttggccgtggccgtgcggtcgccatgcgggctcgggctgctgctggtcgcggtggtggt
cctgttggacggggcagtgcaccccctgtgaggaggtag
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