Panicum hallii (Hall's panicgrass): 112889170
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Entry
112889170 CDS
T07366
Name
(RefSeq) exopolygalacturonase-like
KO
K01213
galacturan 1,4-alpha-galacturonidase [EC:
3.2.1.67
]
Organism
phai
Panicum hallii (Hall's panicgrass)
Pathway
phai00040
Pentose and glucuronate interconversions
phai01100
Metabolic pathways
Module
phai_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
phai00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
112889170
Enzymes [BR:
phai01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.67 galacturonan 1,4-alpha-galacturonidase
112889170
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Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
RHS_N
Motif
Other DBs
NCBI-GeneID:
112889170
NCBI-ProteinID:
XP_025811442
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Position
4:complement(5829758..5831029)
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AA seq
423 aa
AA seq
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MQDTKFPGKIAFPNSTMLRALFLLVLVCAAHAGGKAKESSSAPAEGGGGSCDGGTCDITK
MGATAGGKTDSTKAVQEAWTSACGGTGKQKIMIPKGDFLVGPLNFTGPCKGDVTIQLDGN
LLASTDLSQYKANWIEILRVDNLVITGKGTLDGQGPAVWSKNSCAKKYDCKILPNSLVLD
FVNNGEVSGITLLNSKFFHMNMFQCKDIVIKDVTVTAPGDSPNTDGIHMGDSSGVSITNT
VIGVGDDCISIGPGTTKVNITGVTCGPGHGISIGSLGRYKDEKDVTDITVKDCTLKKSTN
GVRIKAYEDAKSVLTASKIHYENIKMEDAANPIIIDMKYCPNKICTASGGSKVTVKDVSF
KNITGTSSTPEAVSLLCTDKIPCSGVTMDNVNIEYSGKNNKTMAVCKNAKGSATGCLKEL
ACL
NT seq
1272 nt
NT seq
+upstream
nt +downstream
nt
atgcaagacacaaagtttcctggcaaaatagcctttcccaacagcaccatgctgagagcc
ctcttcctcctggtgcttgtctgcgctgcgcatgctggcgggaaggcgaaggagagctcc
tccgctccggccgagggtggtggtgggtcctgtgacggcgggacatgcgacatcaccaag
atgggcgcgactgccggcggcaagacggacagcaccaaggctgtgcaggaggcatggacg
tcggcgtgtggcggcaccggaaagcagaagattatgatccccaagggcgacttcctggtc
gggccgctcaacttcacgggcccatgcaagggtgacgtgaccatccagctggacggcaac
ctgcttgcatccacggacctgagccagtacaaggccaactggatcgagatcctgcgcgtg
gacaacctggtgatcaccggcaagggcacgctcgacgggcaggggcccgctgtgtggagc
aagaactcatgcgccaagaagtacgactgcaagatcctacccaactcgctggttctggac
ttcgtgaacaacggcgaggtgtccggcatcacgctgctcaactccaagttcttccacatg
aacatgttccagtgcaaggacatagtgatcaaggacgtgacggtcacggcgccaggggac
agccccaacacggatggcatccacatgggcgactcctccggggtcagcatcaccaacacg
gtcatcggtgtcggcgacgactgcatctccatcggcccgggtaccaccaaggtcaacatc
accggcgtcacctgcggcccgggtcacggcatcagcatcggcagccttggccggtacaag
gacgagaaggacgtgacggacatcacggtgaaggactgcactctcaagaagtcgaccaac
ggcgtccggatcaaggcgtatgaggacgccaagtcggtgctcacggcctccaagatccac
tatgagaacatcaagatggaggacgcagcgaaccccatcatcatcgatatgaagtactgc
cccaacaagatttgcaccgcaagcggaggctccaaggtcaccgtcaaggacgtgtccttt
aagaacatcaccggtacgtcctccacacccgaggccgtcagcctactctgcaccgacaag
atcccatgcagcggagtcaccatggacaatgtcaatatcgagtacagcggcaaaaacaac
aagaccatggccgtctgcaaaaacgccaagggtagcgccacgggctgcctcaaggagctc
gcctgcctctga
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