Panicum hallii (Hall's panicgrass): 112889234
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Entry
112889234 CDS
T07366
Name
(RefSeq) serine/threonine-protein phosphatase PP1
KO
K06269
serine/threonine-protein phosphatase PP1 catalytic subunit [EC:
3.1.3.16
]
Organism
phai
Panicum hallii (Hall's panicgrass)
Pathway
phai03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
phai00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
112889234
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
phai01009
]
112889234
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
phai03021
]
112889234
03019 Messenger RNA biogenesis [BR:
phai03019
]
112889234
03041 Spliceosome [BR:
phai03041
]
112889234
Enzymes [BR:
phai01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.16 protein-serine/threonine phosphatase
112889234
Protein phosphatases and associated proteins [BR:
phai01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
Catalytic subunits
112889234
Transcription machinery [BR:
phai03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
112889234
Messenger RNA biogenesis [BR:
phai03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
112889234
Spliceosome [BR:
phai03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
112889234
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Metallophos
STPPase_N
Motif
Other DBs
NCBI-GeneID:
112889234
NCBI-ProteinID:
XP_025811539
LinkDB
All DBs
Position
4:49843163..49846640
Genome browser
AA seq
324 aa
AA seq
DB search
MEAAAVDDMIRRLLEARGGRTPRNAQVTDAEIRRLCAAAKDVFLSQPNLLELEAPIKICG
DIHGQYSDLLRLFEYGGYPPEANYLFLGDYVDRGKQSIETICLLLAYKIKYPENFFLLRG
NHECASINRIYGFFDECKRRFNVRIWKIFTECFNCLPVAALIDDKILCMHGGLSPELKNM
DQIRNIARPVDVPDHGLLCDLLWSDPDKEIEGWGENDRGVSYTFGADKVAEFLQKHDLDL
VCRAHQVVEDGYEFFAKRQLVTIFSAPNYCGEFDNAGAMMSIDDSLTCSFQILKPSDKKG
KAGTGNMSKPGTPPRKIKISVARI
NT seq
975 nt
NT seq
+upstream
nt +downstream
nt
atggaggcggcggcggtcgacgacatgatccggcggctcctcgaggcccgcggcgggcgc
acgccgcgcaacgcgcaggtgacggacgcggagatccggcggctctgcgccgccgccaag
gacgtgttcctctcccagcccaacctcctcgagctcgaggcccccatcaagatatgcggg
gatatccatgggcagtattctgatcttcttcgattattcgagtacggtggctacccacca
gaggcgaactatctctttcttggggactatgttgatcgggggaaacagagtatagaaacg
atatgccttctcctggcgtacaagataaagtacccagagaacttctttctcctcagggga
aaccatgagtgtgcctccatcaacagaatatatgggttctttgatgagtgtaagagaaga
ttcaatgtacggatctggaaaattttcaccgaatgctttaactgcctcccagtggctgca
cttatcgatgacaagatcttatgcatgcacgggggtttgtctcctgaattgaagaatatg
gatcagatacgcaacattgcccgtcctgtggatgtgcccgaccatggtctcctctgtgat
ctgctatggtcagaccctgataaagagattgaaggttggggagagaatgacaggggtgtg
tcctacactttcggagctgacaaggtagctgagtttcttcagaaacacgatcttgacctt
gtctgcagggctcaccaggtcgtggaggatgggtatgaattcttcgccaagcgccagctc
gttactatattctctgcacccaactactgcggcgagtttgacaatgctggtgccatgatg
agcatagatgattccctaacatgttcgttccagatacttaaaccttcagataagaaagga
aaagctggaactggaaacatgtcaaaacctggaacaccacctaggaagataaaaataagc
gtcgctcgtatctag
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integrated database retrieval system
