Panicum hallii (Hall's panicgrass): 112889262
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Entry
112889262 CDS
T07366
Name
(RefSeq) fanconi-associated nuclease 1 homolog isoform X1
KO
K15363
fanconi-associated nuclease 1 [EC:3.1.21.-
3.1.4.1
]
Organism
phai
Panicum hallii (Hall's panicgrass)
Pathway
phai03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
phai00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
112889262
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
phai03400
]
112889262
Enzymes [BR:
phai01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.1 phosphodiesterase I
112889262
DNA repair and recombination proteins [BR:
phai03400
]
Eukaryotic type
DSBR (double strand breaks repair)
FA (Fanconi anemia) pathway
Other FA pathway factors
112889262
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
VRR_NUC
FAN1_TPR
HIRAN
FAN1_HTH
Sgf11
Motif
Other DBs
NCBI-GeneID:
112889262
NCBI-ProteinID:
XP_025811590
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All DBs
Position
4:49584755..49591635
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AA seq
976 aa
AA seq
DB search
MLTGRESLVRLIGRRRRSPLPASLAAVLSPSSPFPAASTAQADDGGGSGEAAGAEAGPSS
GGSGGVGVGAEWVSCPVCGESIRGSDYCVNTHLDICLTRGTKRKLTQSTLLNFRFSRKVS
AEPASNNLKNEIKTESEKQIDEDLSRDQTFFSLDIDIEGSKAGASISSPGCLNGSLGISK
MISTYVPSNTLLPNVKDAVSNVPVEHCSSSMFPTVATSRSIDACADLNSSTIIAVDTVIV
GRRFHEDIELREDAGITFQRDPQNAKDSDAIKVLYAASECEEMLGYLPRELAKVLAPLMD
RQYVECEGYVVGLPEQQLGNVPIQITVQKYQRNDDPKYLQSLWEKFISTIKSGNFQRPTS
ARYQKNFNLMISDVIANHTHVFSDIEKSFLASFKSLSDDGQCLFVRIYTRKGPWFRKSTI
LYREILDLEHAAMELKLAGYIDMLSCTVDPSEYDMKEILDVLSVPEMKEILKELQKSIYC
LSEVQPLPKHWPLERITQPAHVDTSLCAPFCLYIIMVPGTCIRISKMADELLWRIQRLFF
LNGDQDLSSFLLVEFGVVKFPDYACSISHRLFQERSDLLEYEEAIRVAQVMDESLDNNNM
DLVTRCIDLSENRLCAMSKQENATSPEHSPSFFSCFSSSWVYSKILTLGVSVYERDRRYE
DAIRILKILLSKIACDRRRGYWTLRLSVDLEHMGRPNESLSIAEGGVIDPWVRAGSKFAL
QRRVLRLSKPPRRWKIPSYADYVKRNIKEVNIEGRPLNCETGAKNLFYGYDGELCGVEQL
ALQYYADEGGGWQGTHSEGGIWMTIFGLLMWGVMFSDIQDVFQSKFQMAPLDLETDDFYK
SRKDLAESQLKKIQDGMAEEMLISSWELHQGTSCHGVNWDRHSLTDLRAVVACIGGHRLA
LLLRHLAIDYRSWSSGMPDLLLWRFLDERGGGEAKLVEVKGPRDQLSEQQRAWILVLMDF
GFDVEVCKVSPVAKRR
NT seq
2931 nt
NT seq
+upstream
nt +downstream
nt
atgctgaccgggcgggagagcctggtccgcctcatcggccggcgccgccgctcccctctc
ccggcctcgcttgccgccgtcctatccccgtcctccccgttccctgctgcctccaccgct
caggccgacgacgggggcggctcgggcgaggcggcgggggccgaggctggtccgtcctct
ggaggaagcggcggcgtgggtgtgggcgcggagtgggtctcctgccccgtatgcggcgag
tccatccgtgggtcggactactgcgtcaacacccacctcgatatatgccttactagagga
acaaaacgaaaattaacacaaagcacccttcttaattttagattcagtagaaaggtttcc
gctgagcctgcttcaaataatttgaaaaacgagattaaaacagaaagtgagaaacagatt
gatgaggatttatctagagaccaaacattcttttcgctggatattgacattgagggttca
aaggctggtgcttctatttcatcacctggttgtctgaatggctcacttggcatttctaag
atgattagtacctatgtaccttcaaatactctcttgccaaatgttaaggatgctgtaagt
aatgttccagtggaacactgctcttctagcatgtttccaacagtggcaacctctcgcagt
attgatgcatgtgcagacttgaattctagcaccattatagcagttgacactgtcatagtt
ggccggaggttccatgaggacattgaattgagagaagatgcaggcattacttttcagaga
gatcctcagaatgctaaggactctgatgctataaaggtgctttatgcagcatctgaatgc
gaggagatgcttggatatttgcctcgagagcttgctaaagttttggctcctctaatggac
agacagtatgttgaatgcgagggatatgtggttggtttgcctgaacaacagcttggcaat
gttcccatccagattactgtccagaaatatcagagaaatgatgatccgaagtatttgcaa
tccttatgggaaaagttcatcagcaccattaaaagtggaaattttcagcgacctacaagt
gcaagataccagaaaaattttaatttgatgatatcagatgttattgccaaccatacacat
gtttttagtgatatagaaaaatcatttttagcttcttttaagtcgttgtcagatgatggg
caatgcctttttgtaaggatttacactcgaaaagggccatggttccgaaagagcaccatc
ttgtatcgtgagatattagatctggagcatgcagcaatggagctgaagttggcaggttat
atcgacatgctttcttgcacagttgatccatctgaatatgatatgaaggagattcttgat
gttttaagtgttcctgaaatgaaagaaattctaaaggagcttcagaagtcgatatattgt
ttgtctgaggttcagccgctgcccaagcattggccccttgaaaggataacacaacctgca
cacgtcgacacgagcttgtgtgcacccttctgtctttatatcataatggtacctggaacc
tgtataagaatttctaagatggcagatgaacttctgtggcgtatccagaggctctttttt
ctaaatggcgatcaagatctttcttcctttctattagtggaatttggtgtcgtgaagttc
ccagactatgcttgcagcatctcccaccgcctttttcaagaaagaagtgatctgcttgag
tatgaagaggctatccgagttgcacaagtgatggatgaatcccttgataataataacatg
gacttggtgacaagatgcattgatttatctgagaatcgattatgcgctatgtcaaaacaa
gaaaatgcaacttcacctgaacattccccatcgttcttttcatgcttttcatcttcctgg
gtctattcgaaaatactcacgttaggtgtctctgtttatgaacgagaccgcaggtatgaa
gatgcaatcaggattctaaagatactactcagtaaaattgcttgtgatagacggcgaggg
tattggacactgaggctatctgttgatttggagcatatgggtcgtccaaatgagagcctt
tccatagctgaaggaggagtaattgatccatgggttcgtgctggttcaaagttcgcgctg
caaaggagagtgctgcgtttaagcaaacctccacgacgctggaaaattcccagttatgcc
gattatgtcaaaagaaatataaaagaggtgaatattgaaggaaggccattaaattgtgag
acaggagcaaagaatttattttatggttatgacggggaactttgtggggttgagcagttg
gctttacaatattatgctgatgaaggtggcggttggcaaggtacccattcagaaggtggc
atttggatgactatctttggccttctgatgtggggtgtaatgttttcagacatacaagat
gttttccagtctaaattccagatggctccccttgatctggaaacagatgatttctacaaa
tcaagaaaggaccttgcagaatcccagcttaagaagatacaagatgggatggctgaagag
atgcttatcagctcctgggagctgcatcaggggacatcctgccacggcgttaattgggac
cgtcattccttaactgatttacgggctgttgttgcatgcattggcggccatcgcttggca
ttgctcctccgccatctagccattgattacagaagctggtctagcggaatgcccgatcta
ctgctatggcgtttccttgatgaaagaggtggaggtgaagctaaacttgtggaggtcaaa
ggaccaagggaccagctgtcagagcaacagcgcgcctggattcttgttcttatggatttt
ggatttgatgtggaagtgtgcaaagtaagcccagttgccaagcggagatag
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