Panicum hallii (Hall's panicgrass): 112889309
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Entry
112889309 CDS
T07366
Name
(RefSeq) protein GLE1 isoform X1
KO
K18723
nucleoporin GLE1
Organism
phai
Panicum hallii (Hall's panicgrass)
Pathway
phai03013
Nucleocytoplasmic transport
phai03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
phai00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
112889309
03015 mRNA surveillance pathway
112889309
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
phai03019
]
112889309
Messenger RNA biogenesis [BR:
phai03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
112889309
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GLE1
Motif
Other DBs
NCBI-GeneID:
112889309
NCBI-ProteinID:
XP_025811664
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Position
1:complement(48717494..48726029)
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AA seq
601 aa
AA seq
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MGFARVELRCPRALDPRPSWTLGDVLAELDALDATRRAAPPTPLKQPPDWASDGSARQKA
FVMRVDDEDDSDDEDDISDGESQALVATGARFSCNDLESSDSDDESGGRVAPYLLMEKRN
LEKSILLELEREHHLKVQEEVRSKLSALEACHQNEIQRTISAFARLQKYAESRKEIDRRL
DVHFQRRIAEVLDRHLSMVQRDHEQKSQIVERRIRDDAALEEAKRKEQAIKEEKLRQERA
RQDSEARQKEAAKLAAEARKTAFEAAQKEAAEKEAAEKEAAKLREAAASQPSQNSQDNIA
GIKVFADKYALEAESRRRALVHNQVPENIHLNKEFSKYDRQIAKSIGKLMPTTDSVRARA
SELIKALDGRDCPRPIACSLFANKIISIVKSRNTKDKTFGNLAFACGYVMLLVTNQVPDA
MDYLLTEFNRVCMYTVPKHLHALNAQARNKDYYRLIGYQEENGQLESTESYLTYVVAYVK
LYAAMIQTEIKGVRHPHGLAEGWKWLAMFLNALPATTATACALHAFLKMAGFALHKKYGS
QFLKILDVISRCFLPALKDQGNKMQSEAVNNLQNYLNDKIYLQEPEGQYLVQQLLSKELF
M
NT seq
1806 nt
NT seq
+upstream
nt +downstream
nt
atgggcttcgcgcgcgtggagctgcggtgccccagggccctcgacccgcgcccgagctgg
acgctcggcgacgtcctcgcggagctcgacgcgctggacgccacccgccgggccgcgccg
cccacacccctgaagcagccgccggattgggctagcgatggcagtgcgagacagaaggcc
tttgtgatgcgggttgatgacgaagacgactcagatgatgaagacgatattagtgatggg
gagtcccaggctcttgtggccacaggagcaaggttctcgtgcaatgacctcgaatccagt
gattcagacgatgaatcaggtggccgggttgcaccgtacctcttaatggagaaaaggaac
ctagagaagagcattcttcttgagctggaacgcgagcatcatctcaaagttcaagaagaa
gtcagaagtaagctatctgcattggaggcatgccaccaaaatgaaatccagagaacaatt
tctgcgtttgctcgacttcagaaatatgcagaatcaagaaaagaaatagatagaagacta
gacgtacacttccagagaagaattgcagaagtactcgacagacacttatctatggtccaa
agggatcatgaacagaaatcccagattgtagaacgtcgaataagagatgatgcagctctt
gaagaagctaaaagaaaagagcaagctatcaaggaagaaaagttaaggcaggaaagagcc
cggcaagattcagaggctaggcagaaggaagctgcaaaattagcagctgaagcacggaaa
acagcatttgaggctgctcaaaaggaagcggcagaaaaggaagctgcagaaaaggaggct
gccaaattgagggaagcagcagcttcccaacctagtcaaaattctcaggataatattgca
ggtatcaaagtttttgccgataaatatgcattagaagcagaatcacggaggcgtgcattg
gtacacaatcaagtgccagaaaacattcatctcaacaaggaattcagcaaatatgaccga
caaattgccaaatccataggtaaacttatgccgaccactgacagtgtcagagcaagggct
agtgagcttattaaagctttagatggacgagattgtccccgtccaatcgcatgttctcta
tttgcaaacaagatcatttcaattgtcaagagtagaaatacaaaggacaaaacctttgga
aacttggcctttgcatgtggatatgtcatgctattagtcacaaaccaggtaccagatgca
atggattatcttctaactgagttcaacagagtttgcatgtacacagttccaaagcatctg
catgctttgaatgcacaagcacgtaataaagattattatagattgataggttaccaggaa
gaaaatggacaacttgagagcactgaaagttatttaacatatgtcgttgcatacgtcaaa
ctgtatgcggcaatgattcagactgaaatcaaaggtgtacgtcatcctcacggcttagcc
gagggatggaagtggcttgcaatgttcctcaatgctctcccagctaccacagccactgcg
tgtgctcttcatgctttcctcaagatggcgggttttgcacttcacaaaaaatatggatca
caattcctgaaaattctggatgtgatatcacggtgctttttaccagccctgaaagatcaa
ggcaacaaaatgcagtccgaggctgtcaacaatctacagaattatctgaatgacaaaatc
tacctccaggaacctgaagggcagtaccttgttcagcaactactgtccaaagagttgttc
atgtga
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