KEGG   Panicum hallii (Hall's panicgrass): 112889331
Entry
112889331         CDS       T07366                                 
Name
(RefSeq) cullin-3A-like
  KO
K03869  cullin 3
Organism
phai  Panicum hallii (Hall's panicgrass)
Pathway
phai04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:phai00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    112889331
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:phai04121]
    112889331
   03400 DNA repair and recombination proteins [BR:phai03400]
    112889331
Ubiquitin system [BR:phai04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul3 complex
    Cullin
     112889331
DNA repair and recombination proteins [BR:phai03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    Other NER factors
     112889331
SSDB
Motif
Pfam: Cullin Cullin_AB Cullin_Nedd8 WAC_Acf1_DNA_bd
Other DBs
NCBI-GeneID: 112889331
NCBI-ProteinID: XP_025811691
LinkDB
Position
1:54420226..54423394
AA seq 736 aa
MSGGGPPRKRNFKIEAFKHRVELDPKYAERTWKVLEHAIHEIYNHNASGLSFEELYRSAY
NMVLHKYGEKLYDGLQSTMTWRLKEISKSIETAQGGLFLEELNAKWMDHNKALQMIRDIL
MYMDRTYVPTAHRTPVHELGLNLWRDHIIHSPMIHSRLLDTLLDLIDRERMGEVINRGLM
RSITKMLMDLGPAVYQDDFEKPFLEVSASFYSGESQEFIECCDCGNYLKKAERRLNEEME
RVSHYLDAGSEAKITSVVEKEMIANHMHRLVDMENSGLVNMLVDDKYEDLGRMYALFRRV
PDGLSRIRDVMTSYLRETGKQLVTDPERLKDPVEFVQRLLDEKDKHDKIISVAFGNDKTF
QNALNSSFEFFINLNNRSPEFISLYVDDKLRKGLKGATEEDVEVILDKVMMLFRYLQEKD
VFEKYYKQHLAKRLLSGKTVSDDAERSMIVKLKTECGYQFTSKLEGMFTDMKTSQDTMQD
FYAKKSEELGDGPTLDVHILTTGSWPTQPSPPCNLPTEILTVCEKFRSYYLGTHNGRRLT
WQTNMGTADIKATFGKGQKHELNVSTYQMCVLMLFNNADGLTYKDIERDTEIPASDLKRC
LQSLACVKGKNVLRKEPMSKDISEDDTFYFNDKFTSKLVKVKIGTVVAQKESEPEKQETR
QRVEEDRKPQIEAAIVRIMKSRRVLDHNSIVAEVTKQLQARFLPNPVVIKKRIESLIERE
FLERDKVDRKLYRYLA
NT seq 2211 nt   +upstreamnt  +downstreamnt
atgagcggcggcggcccgccgaggaagcgcaacttcaagatcgaggcgttcaagcaccgt
gtggagctcgaccccaagtacgcggagcggacatggaaggtcctcgagcacgccatccac
gagatctacaaccacaacgccagtggcctctccttcgaggagctttacaggagtgcctac
aacatggtgcttcacaagtatggagaaaagctctatgatggccttcagagcacaatgaca
tggcgcttgaaggaaatatcgaaatcgatagagactgcacagggtggtttatttctggag
gagctgaacgcaaagtggatggatcacaacaaggcactacagatgatccgagatattcta
atgtacatggataggacatatgtcccgacagctcataggacacctgttcatgaacttggt
ctgaatttgtggagggatcatattattcactcccccatgatccatagtcggctgcttgac
acccttctggatcttatagacagggaaagaatgggtgaagtgattaacagaggcctgatg
aggagcataacgaagatgctgatggatcttggtcctgctgtatatcaagatgattttgag
aaaccatttctggaagtttcggccagcttctacagtggggagtctcaagaattcattgag
tgctgtgactgtgggaactaccttaagaaggccgagaggcgtctaaatgaggaaatggag
cgtgtctcacactacttggatgctggcagtgaggcaaagataactagtgtggtggagaaa
gaaatgattgccaatcacatgcacagattggttgacatggaaaattcagggcttgtgaac
atgctagtagatgacaagtatgaagatttgggtcggatgtatgccttgttccgaagggtt
cctgatgggctatcaaggattagagatgtgatgacttcttacctgagggaaacagggaag
cagttagtgacagatccagaaaggttgaaagacccagtggaatttgttcagcgattgtta
gacgagaaggacaagcatgataagatcatcagtgttgcttttggcaatgacaaaaccttc
cagaatgctctgaattcatcctttgagtttttcatcaacttaaacaatagatcacctgaa
ttcatatcattatatgttgatgacaaacttcgaaaaggactaaaaggggctacagaagaa
gatgtggaggttatactggacaaagtcatgatgctgttccggtacctccaagagaaggat
gtgtttgagaagtactataagcagcatttggcgaaaaggctcctgtctggcaaaactgtt
tctgatgatgctgagagaagtatgatagttaaactcaagacagaatgtggataccagttc
acttccaaactagagggcatgtttactgatatgaaaacctctcaggacaccatgcaagac
ttctatgccaagaagtctgaggaacttggggatggccctacgcttgatgtccacattttg
acaactggttcttggccaacacagcccagtcctccttgcaaccttccaactgaaatcctt
acagtatgtgagaaattccggtcatattatcttggaactcacaatggccggagattgaca
tggcaaacaaacatgggcacagctgacataaaagccacattcggaaaaggccagaagcat
gagctgaatgtatccacttatcagatgtgtgttctcatgctgtttaacaatgctgatgga
ttgacctacaaagacattgaacgggatactgagatacctgcctcagacctaaagagatgt
ctacaatctcttgcttgtgtcaaggggaagaatgttctccgtaaagagcccatgagcaaa
gatatatcagaggatgacacgttctactttaatgataagttcacaagcaagcttgttaaa
gtgaagattgggacagtggtggcacaaaaggaatctgagccagagaaacaggagactcgc
caacgggttgaggaggacaggaaacctcagattgaagcggccattgtcaggatcatgaaa
tcccggagggtgttggatcataacagcattgtagctgaggttacgaagcaattgcaggcc
cggttcttgccaaaccctgttgtcataaagaaacgcattgaatctctaattgaacgtgaa
ttcttggaaagagacaaagtagatagaaaattatatcgttaccttgcatag

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