Panicum hallii (Hall's panicgrass): 112889456
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Entry
112889456 CDS
T07366
Name
(RefSeq) E3 ubiquitin-protein ligase makorin isoform X1
KO
K15687
E3 ubiquitin-protein ligase makorin [EC:
2.3.2.27
]
Organism
phai
Panicum hallii (Hall's panicgrass)
Brite
KEGG Orthology (KO) [BR:
phai00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
phai04121
]
112889456
Enzymes [BR:
phai01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
112889456
Ubiquitin system [BR:
phai04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
112889456
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-CCCH
zf-CCCH_4
zf_CCCH_4
zf-CCCH_2
Torus
zf-CCCH_3
zf-C3HC4
zf-RING_2
zf-RING_5
RING_XB3-XBAT31
zf-rbx1
zf-C3HC4_2
zf-RING_UBOX
zf-CCCH_9
IBR_1
Motif
Other DBs
NCBI-GeneID:
112889456
NCBI-ProteinID:
XP_025811900
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All DBs
Position
4:complement(43088804..43094920)
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AA seq
408 aa
AA seq
DB search
MSTNRVLCKFFMHGACLKGEYCEFSHDWKDQANNVCTFYQKGACSYGSRCRYDHVKVSRN
PTVLLPSPSSSTARLTSTSLQLSSSGHPPRTGHPTDSSNQRNQISVDVLAHSASKPAWRN
DFQHVSEDGIDWSSNQTLQNQTSLKPADLPICSFAAAGNCPYGEGCPQMHGDLCSTCGKM
CLHPYRPDEREEHIKLCEKNHKRLEALKRSQEIECSVCLDRVLSKPTAAERKFGLLSECD
HPFCVACIRNWRSNSPASGMDVNSALRACPICRKLSYYVIPSVLWYFSKEEKEEIIESYK
SKLKSIDCKYFDFGTGSCPFGTSCFYRCGRVGAPQGVKHWNCSQEECFRAQYQPTRQIPC
YLCAVPDLHAYRDGRLEEVVLRHLDADDGSTVIAKNIRLSDFLSRMHL
NT seq
1227 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaccaatagggttctttgcaagttcttcatgcatggagcttgcttgaaaggagag
tattgtgagttctcccatgactggaaagatcaagcaaataatgtttgcacattctaccag
aaaggtgcatgctcatatggtagccgttgcagatatgaccatgtcaaagtttctcgtaac
cctacagttctgctgccatcaccatcgtcaagtactgcaagacttacatctacttctctt
caactttcaagttccggtcatcctcctcgcacaggacatccaacagattcaagtaaccaa
agaaatcagatatctgtggatgtgctggcacattctgccagtaagcctgcatggagaaac
gattttcaacatgtttcagaggatggaattgactggtcctctaaccaaactttgcaaaac
cagacatcattgaaacctgctgatctgcctatttgttcttttgctgctgctggtaattgt
ccttatggggaagggtgccctcaaatgcatggagatctttgcagtacctgtgggaaaatg
tgcttgcatccttatcgtcctgatgagagggaggagcatatcaagttatgtgagaaaaac
cacaaacgtcttgaagctctgaaacgcagccaagagatagaatgcagtgtctgtttggat
cgtgtgctatcaaagcctactgctgctgaaagaaagtttggactgttatctgaatgtgat
catcctttctgtgtcgcatgcattagaaattggcgtagcaattctcctgcatctggtatg
gatgtgaattcagcactaagggcatgtccaatatgtcgcaaactttcgtactatgtcatt
ccaagtgttctttggtacttctcgaaggaagagaaggaggagatcattgaaagctacaaa
tccaagctcaagtctattgattgcaagtacttcgattttgggactggctcatgccccttt
ggtacaagttgtttctacaggtgtggccgtgtgggagcacctcaaggggtgaagcactgg
aattgctctcaggaggagtgttttagagcccagtaccagcctaccagacagattccttgc
tacctatgtgcggtacctgatctacatgcctatagggatggacgcttggaagaggtcgta
ctgcggcatcttgatgctgacgatggaagtacagtaattgcaaaaaatatcaggctgtcg
gacttcctcagtcggatgcatctttag
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