Panicum hallii (Hall's panicgrass): 112889626
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Entry
112889626 CDS
T07366
Name
(RefSeq) coatomer subunit beta'-2-like isoform X1
KO
K17302
coatomer subunit beta'
Organism
phai
Panicum hallii (Hall's panicgrass)
Brite
KEGG Orthology (KO) [BR:
phai00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
phai04131
]
112889626
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
phai04147
]
112889626
Membrane trafficking [BR:
phai04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Coat protein complex I (COP-I)
112889626
Exosome [BR:
phai04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
112889626
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
B-prop_COPA_B_2nd
TPR_COPA_B
WD40
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_EML_2
WDR55
Beta-prop_WDR75_1st
EIF3I
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
WD40_MABP1-WDR62_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_2nd
Beta-prop_EIPR1
Beta-prop_TEP1_C
WD40_MABP1-WDR62_1st
Beta-prop_RIG_2nd
Beta-prop_SCAP
WDR90_beta-prop_4th
ANAPC4_WD40
Beta-prop_HPS5
Beta-prop_IFT140_1st
PEP5_VPS11_N
NBCH_WD40
Beta-prop_DCAF4
Beta-prop_SPT8
Beta-prop_IFT122_1st
WD40_RFWD3
Beta-prop_WDR75_2nd
Beta-prop_WDR35_TULP_N
TPR_1
TPR_8
TPR_GEMI5
TPR_2
HEAT_GCN1
WD_LRWD1
Clathrin
Motif
Other DBs
NCBI-GeneID:
112889626
NCBI-ProteinID:
XP_025812139
LinkDB
All DBs
Position
4:complement(6795809..6807052)
Genome browser
AA seq
907 aa
AA seq
DB search
MPLRLEIKRKLAQRSERVKSVDLHPTEPWIMSSLYSGSVCIWNYQTQTMVKSFEVSELPV
RSAKFIPRKQWVVAGADDMFIRVYNYNTMDKVKMFEAHTDYIRCVAVHPTLPYVLSSSDD
MLIKLWDWDKGWMCTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTVKIWSLGSPDPNFT
LDGHSKGVNCVDYFTGGDRPYLITGSDDQTAKVWDYQTKSCVQTLEGHAHNVSAVCFHPE
LPIIMTGSEDGTVRLWHSTTYRLENTLNYGLERVWALGYMKGSRRVVIGYDEGTIMIKIG
REEPVASMDSSGKIIWAKHNEIQTVNIKAVGADAEIADGERLPLSVKELGSCDLYPQSLR
HNPNGRFVVVCGDGEYIIYTALAWRNRSFGSALEIVWSTDGEYAVRESPSKIKIYSKNFQ
ERKSIRPAFSAERIHGGVLLAMCTNDFICFYDWAECRLIRRIDVNVKNVYWADSGDLVTI
ASDSSFYILKYNRDIVSSHLDGGASVGEEGVEDAFELLHEINERVRTGLWVGDCFIYNNS
SWRLNYCVGGEVTTMFHLDRPMYLLGYLANQSRVYLIDKEFNVVGYTLLLSLIEYKTLVM
RGDLERANTILPSIPKEQHNSVAHFLESRGMLEEALDIATDPNYRFDLAVQLGSLEIAKE
IAVEARSESKWKQLGELAMSTGKLEMAEECLLQATDLSGLLLLYSSLGDAEGITKLASMA
KELGKNNVAFLCLFMLGKLEECLQLLVDSNRIPEAALMARSYLPSKVSDIVSIWKKDLQK
VNSKAAESLADPAEYPNLFEDWQIALSVESTIAPKRGVYPPAEEYMTYAERPNESLVEAF
KSMNVEEEIPSENGDPAHEVIEDDGVEESQEDAVEVEPDGSIDSGVLVNGNDGEEHWGMN
NAGTSSA
NT seq
2724 nt
NT seq
+upstream
nt +downstream
nt
atgccgctgcggttagagatcaagaggaagctcgcgcagaggtcggagagggtcaagtcc
gtcgacctgcatccaaccgaaccatggatcatgtcaagcctttattctggcagtgtctgc
atctggaactaccagacgcagacaatggtgaaatcttttgaagtcagcgagttaccagtt
cgttcggctaaatttattccacgaaagcaatgggttgtggctggtgccgatgacatgttc
atccgtgtgtataactataatactatggataaggtgaagatgtttgaagctcacactgat
tacattaggtgtgtggctgttcacccgaccctgccttatgtgttgtcatcgtcagatgac
atgctcataaagctctgggactgggataagggctggatgtgtactcaaatctttgagggc
cactctcactatgtcatgcaagtcacatttaaccccaaggatacaaatactttcgccagt
gcttcccttgatcgtactgtaaagatctggagtcttggttcacctgatcctaacttcaca
ttggatggtcattcaaaaggtgtgaattgtgttgattacttcactggtggtgaccggcca
tatctaattactggctctgatgaccaaactgcgaaggtttgggattatcaaacaaagagc
tgtgttcaaacacttgaaggacatgcccataatgtctctgctgtatgtttccatcccgag
cttccaataataatgacaggttcagaggatggaactgttcgtctatggcactcaactacc
tacaggcttgagaatacacttaactatggccttgaacgagtttgggcattaggttacatg
aagggctcacggagagttgtgattggatatgacgaaggaacaataatgataaagattggc
cgtgaagaacctgttgctagcatggatagcagtggtaaaatcatatgggccaagcataat
gaaattcaaactgttaatatcaaggcagttggcgcggacgctgagatcgcagatggagaa
cgtctaccattgtctgtaaaggagctgggaagttgtgatctttacccacaaagtttaaga
cacaatccaaatgggaggtttgttgttgtatgtggagatggagagtacattatctacaca
gcgctagcatggagaaatagatcctttgggtctgctcttgaaattgtctggtcaactgat
ggagagtatgctgtaagggaaagcccatcaaaaataaagatctacagtaaaaactttcag
gagaggaaaagtataagaccagcattctctgcagaacgtatacatggcggagtgttgctt
gcgatgtgtacaaatgacttcatttgtttctatgactgggcagagtgcaggttgatacgt
cgaattgatgtgaatgtaaaaaatgtatattgggctgacagtggtgatttggtaacaata
gcaagcgattcatcattctacattttgaagtacaatagggatatagtttcttctcatcta
gatggaggggcttcagttggtgaggaaggcgtggaagatgcctttgaattgcttcatgag
ataaatgaacgtgtccgtactgggttatgggtcggagattgtttcatatacaataattct
tcatggcggctaaattactgtgttggaggagaggttactacaatgtttcacttggatcgg
cctatgtatttattaggatacctggctaaccaaagtcgtgtatatctaatcgacaaggag
ttcaatgtggtgggttatactttactactcagtttgattgagtacaaaacacttgtgatg
cgtggggatttggaacgtgcaaataccattttaccatccataccaaaggaacaacacaac
agtgtggcacattttcttgaatcacgtggcatgttggaggaagcccttgatatagcgact
gaccctaattacagatttgacctggctgtgcagcttggcagcctggaaattgcaaaggaa
attgctgttgaggcgcgaagtgaatcaaagtggaagcagctgggggaacttgctatgtcc
actggaaagctagagatggcagaagaatgtctgcttcaagctacagaccttagtgggtta
ttgcttctatattcatcacttggagatgctgaagggataacaaaactggcgtccatggct
aaagagctaggaaagaacaatgttgctttcctttgcttgtttatgctaggcaaattggaa
gaatgccttcaactgttggttgatagcaaccgtattcctgaagcagcattgatggcacga
tcatatcttccaagcaaagtttctgatattgtttcaatatggaaaaaggatcttcagaag
gtgaactccaaagctgcagaatctctggcagatcctgccgagtacccaaacctgtttgag
gactggcagattgctctcagtgtagaatctactattgctcccaagaggggtgtctatcca
cctgctgaggagtacatgacttatgcggagaggcccaatgagagccttgtggaagctttc
aaaagtatgaatgtggaagaagagataccaagtgagaatggagatcctgctcatgaggtc
attgaggatgatggagtcgaggaaagtcaggaggatgccgttgaagttgaacccgatggt
tcaatagatagtggtgttcttgtgaatgggaatgatggtgaggaacactggggtatgaac
aatgcaggaacttcatcagcatga
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