KEGG   Panicum hallii (Hall's panicgrass): 112889752
Entry
112889752         CDS       T07366                                 
Name
(RefSeq) THO complex subunit 4D-like
  KO
K12881  THO complex subunit 4
Organism
phai  Panicum hallii (Hall's panicgrass)
Pathway
phai03013  Nucleocytoplasmic transport
phai03015  mRNA surveillance pathway
phai03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:phai00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    112889752
  09122 Translation
   03013 Nucleocytoplasmic transport
    112889752
   03015 mRNA surveillance pathway
    112889752
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:phai03019]
    112889752
   03041 Spliceosome [BR:phai03041]
    112889752
Messenger RNA biogenesis [BR:phai03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     112889752
    TREX complex
     112889752
Spliceosome [BR:phai03041]
 Complex C
  Other components
   EJC/TREX
    112889752
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    112889752
SSDB
Motif
Pfam: RRM_1 FoP_duplication RRM_3 RRM_10 GRP0
Other DBs
NCBI-GeneID: 112889752
NCBI-ProteinID: XP_025812308
LinkDB
Position
4:complement(47276268..47282610)
AA seq 308 aa
MATSLDVPLDDLIKSRNGRGRGRGRGQGGGRGRSDGQRLARGSWRGRGTGTFRGRGLGVP
SRRPLGVNTRSSSFAIAKSFNKAKDFVWRHDLFEDSMVAAGLSGIESGTKLYISNLHYGV
TREDIQELFSEMGHLKHCAVHYDNNRHPTGSAEVIFTRRSEALAALKRYNNVRLDGKAMK
IEVIGADLGISAAAAPRISVVPGARGRGQREVVMMPGGSGFGRGAAGSSSSLPGWKRGGF
AQRGGGQVRGGFTQRGGGQVRGRGRGRGRSSFGQGRGRGYVRKGNVEKSAEQLDKELDNY
HSGAMNVD
NT seq 927 nt   +upstreamnt  +downstreamnt
atggcaacatctttggatgttccactggatgatttaattaagagcagaaatgggagggga
aggggaagaggcaggggacaaggagggggtcgaggcagaagtgatggccaaagattggct
cgtggctcatggcgtgggcgtggtactggcaccttccgtggaaggggacttggggtgcct
tcgcgaaggccacttggtgttaatactcggtcttcatcctttgctattgccaagtcattc
aataaagcaaaggattttgtgtggagacatgatctgtttgaggatagcatggtggcagct
gggctttctgggatagaatctggtacaaaactgtacatttcaaacttgcactatggagtg
acaagggaagatatacaggagcttttttctgaaatgggtcatttgaagcactgtgctgtt
cactacgacaataatagacacccaactggttctgccgaggtgatattcaccaggagaagc
gaagcgcttgcggcgctgaaacgatataataatgtgcgccttgatgggaaggcaatgaag
attgaagtgataggagcagatttgggtatatctgctgctgctgcaccccggattagtgtt
gttcctggtgcaaggggaagaggacagagagaagttgtaatgatgcctggtggaagtggg
tttggtcgaggtgcagctggctcatctagttcgcttcccgggtggaagcgtggaggtttt
gctcaaagagggggaggacaagtgcgcggaggttttacccaaagagggggaggacaagtg
cgtggtcgcgggcgtggccgtgggcgtagtagctttggccaaggccgtggacgtggctat
gtgcgcaagggaaacgtggagaaatcagcggaacaattggacaaggagcttgacaactac
cattctggtgcgatgaatgttgactaa

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