Panicum hallii (Hall's panicgrass): 112889752
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Entry
112889752 CDS
T07366
Name
(RefSeq) THO complex subunit 4D-like
KO
K12881
THO complex subunit 4
Organism
phai
Panicum hallii (Hall's panicgrass)
Pathway
phai03013
Nucleocytoplasmic transport
phai03015
mRNA surveillance pathway
phai03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
phai00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
112889752
09122 Translation
03013 Nucleocytoplasmic transport
112889752
03015 mRNA surveillance pathway
112889752
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
phai03019
]
112889752
03041 Spliceosome [BR:
phai03041
]
112889752
Messenger RNA biogenesis [BR:
phai03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
112889752
TREX complex
112889752
Spliceosome [BR:
phai03041
]
Complex C
Other components
EJC/TREX
112889752
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
112889752
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
FoP_duplication
RRM_3
RRM_10
GRP0
Motif
Other DBs
NCBI-GeneID:
112889752
NCBI-ProteinID:
XP_025812308
LinkDB
All DBs
Position
4:complement(47276268..47282610)
Genome browser
AA seq
308 aa
AA seq
DB search
MATSLDVPLDDLIKSRNGRGRGRGRGQGGGRGRSDGQRLARGSWRGRGTGTFRGRGLGVP
SRRPLGVNTRSSSFAIAKSFNKAKDFVWRHDLFEDSMVAAGLSGIESGTKLYISNLHYGV
TREDIQELFSEMGHLKHCAVHYDNNRHPTGSAEVIFTRRSEALAALKRYNNVRLDGKAMK
IEVIGADLGISAAAAPRISVVPGARGRGQREVVMMPGGSGFGRGAAGSSSSLPGWKRGGF
AQRGGGQVRGGFTQRGGGQVRGRGRGRGRSSFGQGRGRGYVRKGNVEKSAEQLDKELDNY
HSGAMNVD
NT seq
927 nt
NT seq
+upstream
nt +downstream
nt
atggcaacatctttggatgttccactggatgatttaattaagagcagaaatgggagggga
aggggaagaggcaggggacaaggagggggtcgaggcagaagtgatggccaaagattggct
cgtggctcatggcgtgggcgtggtactggcaccttccgtggaaggggacttggggtgcct
tcgcgaaggccacttggtgttaatactcggtcttcatcctttgctattgccaagtcattc
aataaagcaaaggattttgtgtggagacatgatctgtttgaggatagcatggtggcagct
gggctttctgggatagaatctggtacaaaactgtacatttcaaacttgcactatggagtg
acaagggaagatatacaggagcttttttctgaaatgggtcatttgaagcactgtgctgtt
cactacgacaataatagacacccaactggttctgccgaggtgatattcaccaggagaagc
gaagcgcttgcggcgctgaaacgatataataatgtgcgccttgatgggaaggcaatgaag
attgaagtgataggagcagatttgggtatatctgctgctgctgcaccccggattagtgtt
gttcctggtgcaaggggaagaggacagagagaagttgtaatgatgcctggtggaagtggg
tttggtcgaggtgcagctggctcatctagttcgcttcccgggtggaagcgtggaggtttt
gctcaaagagggggaggacaagtgcgcggaggttttacccaaagagggggaggacaagtg
cgtggtcgcgggcgtggccgtgggcgtagtagctttggccaaggccgtggacgtggctat
gtgcgcaagggaaacgtggagaaatcagcggaacaattggacaaggagcttgacaactac
cattctggtgcgatgaatgttgactaa
DBGET
integrated database retrieval system