Panicum hallii (Hall's panicgrass): 112889886
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Entry
112889886 CDS
T07366
Name
(RefSeq) pectate lyase-like
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
phai
Panicum hallii (Hall's panicgrass)
Pathway
phai00040
Pentose and glucuronate interconversions
phai01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
phai00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
112889886
Enzymes [BR:
phai01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
112889886
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Motif
Pfam:
Pectate_lyase_4
Pec_lyase_N
Beta_helix
Motif
Other DBs
NCBI-GeneID:
112889886
NCBI-ProteinID:
XP_025812460
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Position
4:50742402..50743941
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AA seq
433 aa
AA seq
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MAAGLLIRSPLPVVLFCVLAAAVAAAPNVTSDEEYWAARAEAARASNLAAYVSDPVAAMN
RFNAETLRATTRRSLGRYQGPCMATNPIDRCWRCRADWAADRRRLARCARGFGHRTAGGA
GGKIYVVTDASDDEMVIPRKGTLRYGAIQDRPLWIVFARDMVVRLRQELIVNHNKTIDGR
GAQVHIVGAQITLQSVRHVIIHSVHIHHSAPHSGGMIRDSKRHYGLRTRSDGDGISILSS
SNVWIDHVSMYRCSDGLIDVVNGSTAITISNSHFTKHDHVLLFGASNDNPQDAAMQVTVA
FNHFGKGLVQRMPRCRYGFFHVVNNDYTHWQMYAIGGNKNPTIISQGNRFIAPDDPNAKE
VTKREYTPYGEYKEWVWKSQGDVMMNGAFFNESGGQNERKYDQLDFIPAKHGSYVGQLTR
FAGALNCRVGEPC
NT seq
1302 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggggttattaataaggagccccctgcccgttgttctcttctgcgtcctcgcc
gcggccgtcgcggcggcgcccaatgtcacctccgacgaggagtactgggcggcgcgcgcg
gaggcggcccgcgccagcaacctcgcggcctacgtcagcgatcccgtcgccgccatgaac
cgcttcaacgcggagacgctccgggccacgacgcggcggtcgctggggcggtaccagggc
ccgtgcatggcgacgaaccccatcgaccgctgctggcggtgccgcgccgactgggcggcg
gaccggcggcggcttgcgcggtgcgcgcgcgggttcgggcaccggaccgccggcggcgcg
ggcgggaagatctacgtggtgacggacgcgagcgacgacgagatggtgatcccgcggaag
ggcacgctccggtacggcgcgatccaggaccgtccgctgtggatcgtgttcgcgcgcgac
atggtggtgcggctccggcaggagctcatcgtgaaccacaacaagaccatcgacggccgc
ggcgcgcaggtgcacatcgtcggcgcgcagatcacgctgcagagcgtgcggcacgtgatc
atccacagcgtccacatccaccactcggcgccgcactcgggggggatgatccgcgactcg
aagcgccactacgggctgcgcacccgcagcgacggcgacggcatctccatcctgtcctcc
agcaacgtctggatcgaccacgtctccatgtaccggtgctccgacgggctcatcgacgtc
gtgaacgggtccacggcgatcaccatctccaacagccacttcaccaagcacgaccacgta
ctgctgttcggggccagcaacgacaacccgcaggacgcggcgatgcaggtgaccgtcgcc
ttcaaccacttcggcaaggggctcgtgcagcggatgccccggtgccgctacggcttcttc
cacgtggtgaacaacgactacacgcactggcagatgtacgccatcggggggaacaagaac
cccaccatcatcagccagggcaaccggttcatcgcccccgacgaccccaacgccaaggag
gtgaccaagagggagtacacgccctacggcgagtacaaggagtgggtgtggaagtcgcag
ggggacgtgatgatgaacggggccttcttcaacgagtccggcgggcagaacgagcgcaag
tacgaccagctcgacttcatcccggcaaagcatgggagctacgtcgggcagctcaccagg
ttcgccggcgcgctcaactgccgcgtcggcgagccctgctag
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