Panicum hallii (Hall's panicgrass): 112889947
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Entry
112889947 CDS
T07366
Name
(RefSeq) pectate lyase-like isoform X1
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
phai
Panicum hallii (Hall's panicgrass)
Pathway
phai00040
Pentose and glucuronate interconversions
phai01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
phai00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
112889947
Enzymes [BR:
phai01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
112889947
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GFIT
Motif
Pfam:
Pectate_lyase_4
Pec_lyase_N
Beta_helix
Cu-oxidase_2
Motif
Other DBs
NCBI-GeneID:
112889947
NCBI-ProteinID:
XP_025812536
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Position
4:complement(7049839..7051894)
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AA seq
451 aa
AA seq
DB search
MEAGFQWSRPGSLVLYVAVVVLCAAVSEANIGEFDDYWRQRKLMADAAAEATYRHDPVEV
VNQLNHAVHRSVEKEEISARREMMAQKKKGNKYKGPCLATNPIDRCWRCRQDWATDRKRL
ARCARGFGRNTTGGLAGKFYVVTDGTDDDVVNPRVGTLRWGVIQYEPLWITFGKTMIISL
KEELIIRGDKTLDGRGVQVRIANGSQLTVQFANNVIIHNIHIHDLVSSNKNGGNIRDSPD
HFGWRTVSDGDGITVFGSTNVWLDHLSLSNCQDGLIDVIAKSTGVTISNCHMTNHNDVML
FSSSDSHPEDQIMQITVAFNHFGRGLVQRMPRCRWGFFHVVNNDYTHWLMYAIGGSKAPT
IISQGNRYIAPPNLAAKQVTKQHDAPESVWKNWVWHSEDDLFMEGAYFTVTGGQINRQFN
KKNLIKPKPGSYVTRLTRFSGSLDCRPGKPC
NT seq
1356 nt
NT seq
+upstream
nt +downstream
nt
atggaggcgggcttccaatggagcagaccgggctccttggtcctgtacgtcgccgtcgtc
gtcctgtgcgcggccgtgtcggaggccaacatcggcgagttcgacgactactggcggcag
cgcaagctcatggcggacgccgccgcggaggccacctacaggcacgacccggtggaggtc
gtcaaccaactcaaccacgccgtccacagatcggttgagaaggaggagatcagcgcgagg
agggagatgatggcgcagaagaagaagggcaacaagtacaaagggccgtgcctggcgacg
aacccgatcgaccggtgctggcggtgccggcaggactgggcgacggaccggaagcggctg
gcgcggtgcgcgcgggggttcgggcggaacaccaccggcgggctggccggcaagttctac
gtggtgacggacggcaccgacgacgacgtggtgaacccgcgggtgggcacgctgcggtgg
ggcgtcatccagtacgagccgctgtggatcaccttcggcaagacgatgatcatctcgctc
aaggaggagctcatcatccgcggcgacaagaccctcgacggccgcggcgtgcaggtgcgc
atcgccaacggctcgcagctaacggtgcagttcgccaacaacgtcatcatccacaacatc
cacatccacgacctcgtctcctccaacaagaacggcggcaacatccgggactcgccggac
cacttcggctggcgcaccgtctccgacggcgacggcatcaccgtcttcgggtccaccaac
gtgtggctggaccacctctccctctccaactgccaggacgggctcatcgacgtcatcgcc
aagtccaccggcgtcaccatctccaactgccacatgaccaaccacaacgacgtcatgctc
ttcagctccagcgacagccacccggaggaccagatcatgcagatcacggtcgccttcaac
cacttcggcagaggactcgtgcagaggatgcccagatgccggtggggattcttccacgtg
gtgaacaacgactacacgcactggctcatgtacgccatcggcggcagcaaggccccaacc
atcatcagccagggcaaccggtacatcgcgccgcccaacctcgcggccaagcaggtcacc
aagcagcacgacgcgccggagtcggtgtggaagaactgggtgtggcactcggaggacgac
ctcttcatggagggcgcctacttcaccgtcaccggcggccagatcaacagacagtttaac
aagaagaacctcatcaagcccaagcccggctcctacgtcaccaggctcacgcgttttagc
ggctccctcgactgcaggcccggcaagccctgctag
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