Panicum hallii (Hall's panicgrass): 112889975
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Entry
112889975 CDS
T07366
Name
(RefSeq) E3 ubiquitin-protein ligase RGLG2-like
KO
K16280
E3 ubiquitin-protein ligase RGLG [EC:
2.3.2.27
]
Organism
phai
Panicum hallii (Hall's panicgrass)
Brite
KEGG Orthology (KO) [BR:
phai00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
phai04121
]
112889975
Enzymes [BR:
phai01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
112889975
Ubiquitin system [BR:
phai04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
112889975
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Copine
zf-C3HC4_3
zf-C3HC4_2
vWA-TerF-like
zf-C3HC4
zf-RING_2
Prok-RING_4
Sina_RING
Motif
Other DBs
NCBI-GeneID:
112889975
NCBI-ProteinID:
XP_025812576
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Position
4:6044990..6049859
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AA seq
443 aa
AA seq
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MGQKDSKPSYSYSYDHGNTSSGYTSRYAGNPSFSYNARYTPSSENNVQPETHARLQRKYS
RIGDDYRSLSQVTEALAQAGLESSNLIVGIDFTKSNEWTGKMSFNRRCLHDIGSTPNPYE
QAISIIGRTLSAFDEDNLIPCFGFGDASTHDQEVFSFYPENRPCNGFEEALERYREIVPT
LRLAGPTSFAPIIETAVGIVDSTGGQYHVLLIIADGQVTRSVDTQYGQLSPQERDTIDAI
VKASQFPLSIVLVGVGDGPWDMMHQFDDNIPARSFDNFQFVNFTEIMSKSIAADRKEAEF
ALSALMEIPEQYKATLDLQLLGRRHRITPRVALPPPTRNAYSRSTSFSQQSSVYSRSSSF
DQQTSGFQQRPESFKQQQPAATRRPDTYAAESALEDRLLCPICMYKSKDLAFGCGHQTCY
ECGKNLERCPLCQDNITTRIRLY
NT seq
1332 nt
NT seq
+upstream
nt +downstream
nt
atggggcaaaaggactccaagccttcatatagctactcttatgatcacggcaatacttcg
tcagggtatacttccaggtatgctggaaatccatcattcagttataacgcgaggtacacg
ccttcttcggagaacaatgtgcagccagaaacacatgccaggttgcagaggaagtattcc
aggatcggcgatgactaccgctctttgagtcaggtgactgaagctttggcacaagcaggc
cttgaatcttcaaatcttattgtaggcattgattttacaaagagcaatgaatggacaggt
aaaatgtccttcaatcgccgctgcctgcatgatattggaagcactccaaacccatatgaa
caagccatatctattattggaaggacactttcagcttttgatgaagataatttgattccc
tgctttggatttggtgatgcatcaactcatgatcaggaggtattcagcttttacccagag
aaccgtccatgcaacggttttgaagaggcgctagaaagatacagagaaattgttccaact
cttcgattagctgggcccacatctttcgctccgataattgagacagcagttggaattgtt
gacagcactggtggtcaataccatgttcttctgataattgctgatggacaggtaacccga
agtgttgatacacaatatggacaattaagtccgcaggagcgagatacaattgacgcaata
gtaaaagcaagccagttccctctatcaattgttcttgttggggttggtgatggaccatgg
gacatgatgcaccagtttgatgacaatatacctgctcgctcatttgacaatttccagttt
gtgaatttcacggagattatgtcaaagagcatagctgctgatagaaaggaagcagaattt
gcattgtcagcactgatggaaattcctgaacagtacaaagcaacacttgatcttcaactc
ttaggacgccggcacagaataactccaagagttgctctgccgccaccaacaaggaatgct
tattcgcggtcaactagctttagtcagcaatctagtgtttattcacgatctagtagcttt
gaccaacaaacaagtggctttcagcaacgtcccgagagcttcaaacagcagcagcctgcc
gccacaaggagacctgacacttatgcagcagaaagtgctttagaggacagactgctgtgc
cccatttgcatgtataaatcaaaggacctcgcatttggttgtggacatcagacttgctat
gaatgcgggaaaaatttggagcgctgccctctatgccaggacaacataaccacaaggatc
aggctgtactga
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