Panicum hallii (Hall's panicgrass): 112889988
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Entry
112889988 CDS
T07366
Name
(RefSeq) DDB1- and CUL4-associated factor 8
KO
K11804
DDB1- and CUL4-associated factor 8
Organism
phai
Panicum hallii (Hall's panicgrass)
Brite
KEGG Orthology (KO) [BR:
phai00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
phai04121
]
112889988
Ubiquitin system [BR:
phai04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
112889988
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GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_EML_2
Beta-prop_TEP1_2nd
WD40_WDHD1_1st
Beta-prop_CAF1B_HIR1
Beta-prop_EML
Beta-prop_EIPR1
WD40_MABP1-WDR62_2nd
WDR55
EIF3I
NBCH_WD40
Beta-prop_IFT122_1st
Beta-prop_RIG_2nd
WD40_MABP1-WDR62_1st
Beta-prop_WDR90_POC16_2nd
Motif
Other DBs
NCBI-GeneID:
112889988
NCBI-ProteinID:
XP_025812591
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All DBs
Position
4:724794..727910
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AA seq
489 aa
AA seq
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MPPERKRMAGLWEREVGGLPPRNFANAFMASKDFVQSLSIHKRLRKHRGCVNTISFNGDG
RLLLSGADDRTVVLWNWVEAVPTVSFHTGHSNNVLHAQFMPFSDDRSIVTCAGDGEVRHS
QIQEGGHATTDKLVELEFAVHRFAVEPGSPYTFYCCCEDSSVWLFDLRGKNAVELFKCRA
ADHFTADATELFAIAIDPMKPYCFAVAGSDEYVRIYDTRKIRLDGNSIFGHPTEHFCPPH
LISENKDGITGLAYSQTSELLASYSHDNIYLFSREHGLHFNNIEVDERLLMDGTNPLSCC
RDELPIPKTFNGHQNQHTIKGVNFLGPNCDYVTSGSDCGRIFIWRKKDGELIRVMTGDKH
IVNCVEQHPSGIVVASSGIDKDIKIWEPGEGENPSIAPVDKVEEDMWLSSSSDSDGFFYN
DDLEYAMDLDDIYVYGNGDEHSSEEDEDTSSEEDDDGDNSAKEDNDGDNSAAGEGGADCE
NSAEDVSDG
NT seq
1470 nt
NT seq
+upstream
nt +downstream
nt
atgccgccggagaggaagaggatggccgggctgtgggagcgcgaggtcggcggcctccct
cccaggaacttcgccaacgccttcatggcctccaaggacttcgtgcaatctctcagcata
cacaagagactacggaagcacaggggctgcgtcaacacgataagcttcaacggggacggg
agattgctcctctccggggcggacgatcggaccgtcgtgctgtggaattgggtggaggct
gtgccaaccgtatcgttccacactgggcacagtaacaacgtgctccacgcgcagttcatg
cccttctcggatgaccggagcattgtcacgtgtgctggtgatggcgaggtgaggcattcg
cagatacaggaagggggtcacgcaactacagacaaacttgttgagttggagttcgcggta
cataggttcgctgttgaaccaggaagtccttacacattctactgctgctgtgaagatagc
tccgtgtggctttttgacctcagggggaaaaatgctgtggaactctttaaatgtagggct
gcagaccatttcactgctgatgccaccgaactctttgctattgccatagacccaatgaag
ccctattgttttgcagtggctggatcagatgagtatgtaaggatatatgatacccgcaag
attcgtctggatggcaattctattttcggtcacccgacagagcacttctgccctccacat
ttgattagtgaaaacaaagatggaataactggtttggcttactcacagaccagtgagcta
ttagcatcctatagtcatgacaatatctaccttttctcaagagagcatggtttacacttc
aacaacattgaggtagatgagcgactcctgatggatgggaccaaccccttatcttgttgt
agggatgagttgcctatacctaagacattcaatggacaccagaaccaacacaccattaag
ggggttaacttccttgggcccaactgtgattatgttacctccgggtcagactgtggccgt
atatttatttggagaaagaaggatggggagctgatcagagtgatgactggagataaacac
attgtaaactgtgtcgaacagcacccttcagggattgttgttgcaagcagtggcattgat
aaagatattaagatttgggaacctggtgaaggtgaaaacccctccatcgctcctgttgac
aaggttgaggaagatatgtggctctccagcagcagtgattctgatggctttttctacaac
gacgatttggagtatgcaatggacttggatgatatttatgtatatggaaatggtgatgaa
cattcatctgaggaagatgaagatacatcatcagaggaagacgatgatggtgataacagt
gccaaagaagacaacgatggtgacaacagtgccgcaggagaaggtggtgctgattgtgaa
aacagtgccgaagatgtaagcgatggttga
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