Panicum hallii (Hall's panicgrass): 112890064
Help
Entry
112890064 CDS
T07366
Name
(RefSeq) probable 1-deoxy-D-xylulose-5-phosphate synthase, chloroplastic isoform X1
KO
K01662
1-deoxy-D-xylulose-5-phosphate synthase [EC:
2.2.1.7
]
Organism
phai
Panicum hallii (Hall's panicgrass)
Pathway
phai00730
Thiamine metabolism
phai00900
Terpenoid backbone biosynthesis
phai01100
Metabolic pathways
phai01110
Biosynthesis of secondary metabolites
Module
phai_M00096
C5 isoprenoid biosynthesis, non-mevalonate pathway
Brite
KEGG Orthology (KO) [BR:
phai00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
112890064
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
112890064
Enzymes [BR:
phai01000
]
2. Transferases
2.2 Transferring aldehyde or ketonic groups
2.2.1 Transketolases and transaldolases
2.2.1.7 1-deoxy-D-xylulose-5-phosphate synthase
112890064
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DXP_synthase_N
Transket_pyr
Transketolase_C
Motif
Other DBs
NCBI-GeneID:
112890064
NCBI-ProteinID:
XP_025812690
LinkDB
All DBs
Position
4:50899781..50904782
Genome browser
AA seq
721 aa
AA seq
DB search
MDTAFLRSPLARNLVYDEFAVLHSASYRFHPLRYSRCNPTNSTPGQTLSASPSRGLTQRV
AALPNVDDFFWEKDPTPILDTIDAPIHLKNLSSKELKQLADEVRSEISFIMSTKCQPCGP
GRSVVELTIAIHYVFNAPMDKILWDAGQHAYAHKILTGRRSLFHTIKQKNGLSGFTSRFE
SEYDPFGAGHGCNSLSAGLGMAVARDINGRKNRIVTVISNWTTMAGQVYEAMGHAGFLDS
NMVVILNDSCHSLLPKADGRPKMSVNAFSSAVSKIQSSKGFRRFREAAKGLAKWFGKGMH
EFAAKVDEYARGMIGPHGATLFEELGLYYIGPIDGHNIDDLICVLKEVATLDSTGPVLVH
VITGTEIDTGGNIRSEITPNDEGPPNSSHDLLKFLETGLSRTYNDCFVEALTAEAENDKR
IVVVHGGMGMDRSLRLFQSSFPDRFFDLGIAEQHAVTFSAGLACGGLKPFCIIPSTFLQR
AYDQIVEDVDMQKIPVRFAITNAGLVGSEGPTNSGPFDITFMSCLPNMIVMSPSNEDELI
DMVATAAMVEDRPICFRYPRGAIVGTSGTLTYGNPLQIGKGEILVEGKEIAFLGYGEVVQ
RCLIARSLLSNFGIQATVANARFCKPLDIDLIRTLCQQHSFLITVEEGTVGGFGSHVSQF
ISLDGLLDGRIKWRPIVLPDRYIEHASLAEQLDLAGLTAHHIAATALTLLGRHRDALLLM
K
NT seq
2166 nt
NT seq
+upstream
nt +downstream
nt
atggacacggcgtttctgcgttctccgcttgctcgcaatctagtttatgacgagtttgcc
gttcttcactccgcaagctaccgtttccatcctctgcggtattcgaggtgcaatccgaca
aactcgacccccggccaaacgctgtctgcttcgccatcaaggggcttgactcagcgagtg
gccgcgttaccaaatgttgatgattttttctgggaaaaggatcccactccgatcctggac
acaattgatgcgcccattcatttgaaaaatctatctagtaaggagctcaagcagttagct
gatgaagttcgttctgaaatatctttcataatgtccacaaaatgccagccatgtggtcct
ggtcgctcagttgtggagctgacaattgctatacattatgtgttcaatgccccaatggat
aagatactgtgggatgctggtcagcatgcgtatgcacacaagattctcacaggaaggcgc
tctctctttcatactattaaacaaaaaaacggcctttctggtttcacatctagatttgag
agcgagtatgatccctttggtgctggacatggatgcaatagtctttctgctggccttggg
atggcggttgcaagggatataaatgggagaaaaaatcgaatagtgacagttataagtaat
tggacaaccatggctggccaggtgtatgaggcaatgggtcatgctggtttcctcgattcc
aacatggtagttattctaaatgatagctgtcactccttgcttcctaaagctgatggccgg
ccaaagatgtcagtcaatgccttttctagtgctgtcagcaagattcaatccagcaaagga
tttaggaggtttagggaggctgcaaagggactggctaaatggtttggcaaaggaatgcat
gagtttgctgccaaagttgacgagtatgctcgtggtatgataggtcctcatggagcaact
ctttttgaagaacttggattatattatattggtcctattgatgggcataacattgatgat
ctcatctgtgtattaaaggaggtcgcaactctagattcaactggtccagtacttgtacat
gtaattactgggactgaaattgacactggtggaaatattaggagtgaaataactccaaat
gacgaagggcctccaaactcaagtcatgatcttcttaaatttttagaaactgggctttct
aggacgtataatgactgctttgtagaagcattaacagcagaagcagagaatgacaagcgc
attgtggtagttcatggtggcatgggaatggatcgatcactccgcttattccagtccagc
ttcccagacagattttttgaccttggcatcgctgagcaacacgctgttaccttttctgct
ggtttggcctgtggaggtttaaagcctttctgcataattccatccacatttcttcagcga
gcatatgatcagatagttgaagatgtggacatgcaaaagataccggttcgatttgctatc
acaaatgctggtctggtggggtctgagggcccaactaattcaggaccatttgatataaca
ttcatgtcctgcttgccaaacatgattgtcatgtcaccatctaacgaggatgaacttatt
gacatggtggcaacagctgcaatggttgaggacagacctatttgcttccggtatcctagg
ggcgccattgttgggactagcggcactttaacgtatgggaatccacttcagattggtaaa
ggagagattcttgttgagggaaaagagatagcttttcttggctatggtgaggtggtccag
cgatgcttgattgctcgatctcttttatcaaactttggcattcaggcgacagttgcaaat
gcaagattttgcaagccacttgacattgatctaatcagaacgctatgtcagcagcatagt
tttcttatcacagtggaagaaggaacagttggcggctttggatcgcatgtctctcagttt
atttcactcgatggtctacttgatggccgaataaagtggcgacccattgtgctaccagac
aggtatatcgaacacgcttcactcgctgagcaactcgacttggctggcctaactgctcat
cacatagctgcaaccgcattgaccctcctagggcgtcaccgagatgcacttctgttgatg
aagtag
DBGET
integrated database retrieval system
