Panicum hallii (Hall's panicgrass): 112890181
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Entry
112890181 CDS
T07366
Name
(RefSeq) E3 ubiquitin-protein ligase RING1-like
KO
K11982
E3 ubiquitin-protein ligase RNF115/126 [EC:
2.3.2.27
]
Organism
phai
Panicum hallii (Hall's panicgrass)
Brite
KEGG Orthology (KO) [BR:
phai00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
phai04131
]
112890181
04121 Ubiquitin system [BR:
phai04121
]
112890181
Enzymes [BR:
phai01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
112890181
Membrane trafficking [BR:
phai04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
112890181
Ubiquitin system [BR:
phai04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
112890181
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Zn_ribbon_19
zf-RING_2
zf-C3HC4_2
zf-RING_11
zf-C3HC4
zf-rbx1
zf-RING_UBOX
zf-ANAPC11
zf-RING_5
zf-C3HC4_3
Zn_ribbon_8
Zf_IFT144_1st
zf-Nse
zf-RING_Vps41
HypA
Anti-TRAP
zf-RING_10
VPS18_RING_C
Zn_ribbon_RPAB4
zf-RING_16
Motif
Other DBs
NCBI-GeneID:
112890181
NCBI-ProteinID:
XP_025812844
LinkDB
All DBs
Position
4:52860453..52863873
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AA seq
324 aa
AA seq
DB search
MSSSSSSPAALRYYCHQCDRTVSISPPASPDDDVLCPRCGGGFVEELHPGDSPAAPAAFF
PPPPSFDLRHPGDLSAFFGPPSPEPPVPGLFDPSNFLHDHFGGLLSGGATIQIVLEGGSA
APLLAPGVSLADYFMGPSGLEQLIQQLAENDPNRYGTPPAAKSAVAALPDVAVSADMMQA
DGGAQCAVCMDDFHLGAAAKQLPCKHVFHKDCILPWLDLHSSCPVCRFELPTDDPDYHQQ
QRASSALALAPAPAPAPAASSPRVAERRFRISLPWPLRAAFGAAAQAESSNPTNDDVPPS
GANNNDHGASGGSPQTQSGYDDLD
NT seq
975 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtcctcgtcgtcctccccagcggcgctgcgctattactgccaccagtgcgaccgc
accgtctccatctccccgcccgcctccccggacgacgacgtcctctgcccccgctgcggc
ggcggtttcgtcgaggagcttcacccaggtgacagccccgccgcccccgcagccttcttc
cccccgccgccctccttcgatctccgccaccccggcgacctctccgccttcttcggcccg
ccctccccggagccgcccgtcccgggcctcttcgacccctccaacttcctccacgaccat
ttcggcggcctcctctccggcggcgccaccatccagatcgtcctcgagggcgggagcgcc
gcgcccctcctcgccccgggcgtcagcctcgcggactacttcatgggaccctcgggcctc
gagcagctcatccagcagctcgccgagaacgaccccaaccgctacggcaccccgcccgcc
gccaagtccgccgtcgccgcgctccccgacgtcgccgtctccgccgacatgatgcaggcc
gacgggggcgcgcagtgcgccgtctgcatggacgacttccacctaggggccgccgccaag
cagctcccctgcaagcacgtcttccacaaggactgcatcctcccgtggctcgatctccac
agttcctgccccgtctgccgcttcgagctgccaaccgacgacccggactaccaccagcag
cagcgcgcgtcgtctgccctcgccctcgcccccgcacccgcccccgctcccgctgcctcc
tcccccagggtggccgagaggaggttcaggatatcgctgccttggcctctcagggccgcc
ttcggtgctgctgcccaggccgagtccagcaatcctaccaatgatgacgtgcctccttct
ggtgccaacaataacgaccatggtgcaagcggcggcagtcctcaaactcaaagcggatat
gatgatctcgactga
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integrated database retrieval system
