Panicum hallii (Hall's panicgrass): 112890227
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Entry
112890227 CDS
T07366
Name
(RefSeq) protein argonaute PNH1 isoform X1
KO
K11593
eukaryotic translation initiation factor 2C
Organism
phai
Panicum hallii (Hall's panicgrass)
Brite
KEGG Orthology (KO) [BR:
phai00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
phai03019
]
112890227
03036 Chromosome and associated proteins [BR:
phai03036
]
112890227
Messenger RNA biogenesis [BR:
phai03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
112890227
Chromosome and associated proteins [BR:
phai03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
112890227
RNA interference (RNAi) pathway
RITS (RNA-induced transcriptional silencing) complex
112890227
microRNA pathway
RISC loading complex
112890227
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Piwi
ArgoN
PAZ
ArgoL1
ArgoL2
ArgoMid
Motif
Other DBs
NCBI-GeneID:
112890227
NCBI-ProteinID:
XP_025812909
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Position
4:complement(6554522..6568352)
Genome browser
AA seq
963 aa
AA seq
DB search
MLEVLDMAPPPQARHQQGPARARGASSGHAPGRKQPLQSSVAQPKAEPAVVPPEGGKRCG
GGGGGGGRRRGGRGRAKAAAAAAAEPRALPAPPPRTVIGPPVPSKGLSFCRRPGFGTVGA
RCVVKANHFLAELPDKDLTQYDVKITPEVSSRAVNRAIMAELVRLYRASDLGMRLPAYDG
RKNLYTAGILPFDAREFVVRLTDEDDGTGVPPREREYRVAIKFAARADLHHLRQFIAGRQ
ADAPQESLQVLDIVLRELANQRYVSIGRSFYSPDIRKPQRLGDGLQSWCGFYQSIRPTQM
GLSLNIDMSSTAFIEPLPVIEFVAQILGKDVISRPLSDANRIKIKKALRGVKVEVTHRGN
VRRKYRISGLTTQPTHELIFPIDDQMNMKSVVEYFKEMYGFTIQHRHLPCLQVGNQKKAN
YLPMEACKIVEGQRYTKRLNEKQITSLLKVTCQRPREQEMDILQTVHQNGYEQDPYAKEF
GINISEKLTSVEARVLPAPWLKYHDTGKEKECLPQVGQWNMVNKKVINGCKVSHWACINF
SRSVPEATARGFCQELAQMCQISGMEFNSEPVIPIYSARPDQVVKALKHVYNIALNKLKG
KELELLLAILPDNNGPLYGDIKRICETDLGLISQCCLTKHVFKISKQYLANVSLKINVKM
GGRNTVLLDAISWRIPLVSDIPTIIFGADVTHPETGEDSSPSIAAVVASQDWPEVTKYAG
LVCAQAHRQELIQDLYKTWHDPQRGTVTGGMIRELLISFRKATGQKPLRIIFYRDGVSEG
QFYQVLLYELDAIRKACASLEPNYQPPVTFVVVQKRHHTRLFANNHKDRNSMDKSGNILP
GTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENNFTADEMQTLTNNLCYTYAR
CTRSVSVVPPAYYAHLAAFRARFYMEPEMSENQTSKSSNGTNGASVKPLPALKEKVKRVM
FYC
NT seq
2892 nt
NT seq
+upstream
nt +downstream
nt
atgctcgaggttctggacatggcgccgccgccgcaggcgcggcaccagcaggggcccgcc
agagccaggggcgccagcagcggccacgcgccggggaggaagcagccgctgcagagcagc
gtggcgcagcccaaggcggagccggcggtcgtgccgccggagggaggcaagaggtgcggc
ggaggaggaggaggaggagggaggcgccgcggcgggcgcggccgggccaaggcggcggcg
gccgccgcggcggagccgagggcgctcccggcgcccccgccgcgcacggtcattgggccg
cccgtgcccagcaaggggctgtcgttctgccggcgcccggggttcgggaccgtcggcgcg
cgctgcgtcgtcaaggccaaccacttcctcgccgagctccctgacaaggacctcacccag
tacgacgtcaagatcacgccggaggtgagctcgcgggccgtgaaccgggccatcatggcg
gagctggtccgcctctaccgcgcgtccgacctcggaatgcgccttccggcatacgacggc
cgcaagaacctctacaccgccgggatcctcccgttcgacgcgcgcgagttcgtcgtgcgc
ctcaccgacgaggacgacggcaccggcgtcccgcctcgggagagggagtacagggtcgcc
atcaagttcgccgcgcgcgccgacctccaccacctccggcagttcatcgctgggcggcag
gcggatgcgccgcaggagtccctccaggtcctcgacatcgtgctccgggagctcgccaac
cagaggtacgtgtctataggccggtccttctactcgccggacatcaggaagccgcagcgg
ctcggcgatggcctccagtcctggtgtgggttctaccagagcatccggccgacccagatg
ggattgtcgcttaacatcgacatgtcgtctacggcgtttatcgagccgctgccggtgatc
gagttcgtggcccagatattagggaaggatgtcatatcaaggccattgtccgatgctaac
cgaatcaagatcaagaaggcactgcgaggcgtcaaagttgaggtcactcaccgaggaaat
gtaaggcggaagtatcgcatttctgggctgacaacacaaccaactcatgaactgattttc
ccaattgatgatcaaatgaatatgaaatccgtagtggagtacttcaaggaaatgtacggg
ttcaccattcagcatcgtcaccttccctgccttcaggttggaaaccaaaagaaggcaaac
tatcttccgatggaggcctgcaagattgttgagggccagagatacacgaagaggctgaat
gaaaaacagatcacatcattgcttaaggttacgtgccaaaggcctagagaacaggagatg
gatattcttcagaccgttcatcaaaatggatacgagcaagatccatatgcaaaggaattt
gggatcaatataagtgagaagctaacctccgttgaagctcgagtccttcctgcaccttgg
ttgaaatatcatgatactggaaaagagaaagagtgcttgccacaggttggtcaatggaac
atggtaaacaagaaagtgatcaacggatgcaaggtgagccattgggcctgtataaacttc
tcacggagtgttccagaagccactgctcggggtttttgccaggaattggcacaaatgtgc
cagatttccggcatggaatttaacagtgagcccgtgataccaatatattcagctagaccg
gatcaagtagtaaaggcacttaaacatgtgtataatattgcattgaataaactcaagggt
aaagaacttgagcttcttctggccatcctccctgacaacaatggtccattgtatggtgac
atcaaacgtatttgtgaaactgatttgggattgatatcgcaatgttgcttaacaaagcat
gtttttaagatcagcaagcagtacttggcaaatgtctccctaaaaattaatgttaagatg
ggaggaagaaacactgtgctcttggatgctataagttggaggattcctttggtcagtgac
ataccaacgattatatttggtgcggatgtaacacatcctgaaaccggggaggactcaagt
ccatcaattgctgcggttgttgcatctcaagactggccagaagttacaaagtatgccgga
ttggtttgtgctcaggcacatcggcaggagctcattcaggacctttacaagacatggcat
gatcctcagagagggactgtaacaggcggcatgatcagggagctgttaatatccttcagg
aaagccactgggcagaaaccattgagaataattttctacagggatggtgttagtgaaggt
caattctatcaagttctcctttacgagttagatgctatccgtaaggcatgtgcatcccta
gaaccaaattaccagcctcctgtaacatttgtggtggttcaaaaacgccaccatacaaga
ctatttgcaaacaatcacaaagatagaaacagcatggacaagagtggaaatattttgcct
ggaaccgtcgttgattctaagatatgccatccaacggagtttgatttctacctctgtagt
catgctggaattcagggaacaagtaggcctgctcactaccacgtcctctgggatgagaac
aatttcacagcagacgaaatgcagacattgacaaacaacctttgctacacttacgcccgg
tgcacacgctcagtttctgttgtaccgcctgcatactatgctcacctggcagcattccgg
gctcggttctacatggaaccggagatgtcagagaaccagacatcaaagagttccaacggc
accaatggagcctcggtgaagcccctgcccgccctgaaggaaaaggtgaagagggtgatg
ttctactgctga
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