Panicum hallii (Hall's panicgrass): 112890292
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Entry
112890292 CDS
T07366
Name
(RefSeq) uncharacterized protein LOC112890292 isoform X1
KO
K04506
E3 ubiquitin-protein ligase SIAH1 [EC:
2.3.2.27
]
Organism
phai
Panicum hallii (Hall's panicgrass)
Pathway
phai04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
phai00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
112890292
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
phai04121
]
112890292
Enzymes [BR:
phai01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
112890292
Ubiquitin system [BR:
phai04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
SINA (Seven in absentia) proteins
112890292
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ADNP_N
Motif
Other DBs
NCBI-GeneID:
112890292
NCBI-ProteinID:
XP_025812989
LinkDB
All DBs
Position
4:complement(5135369..5141914)
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AA seq
338 aa
AA seq
DB search
MGVLNIRINQRLLHCRHCHRRRQPPLPPADTPLPPADTHCFLLDRIIHQMRFKCNFCDSG
YIPYSKFLVHLCGTTPAHLKSVFARGECILATSALVCCECSLPLRPPIFRRLPRKIPICS
ACCHNGDVTSYRHSRELEHLIQGITVKCKACKQYLPFSTFASHKLVNLCGEDKQKAPYEV
GKMDKSIVHGDEVGNDDDSSGDNHGTSEDVFSFEDDSVEEGEELEKPKAVKRVAVNAFKT
LPCDREAKITMPYGQKPAAPTAAQASASPFRRLPIMAPSKPPLPPFIPHRPGTRLFQAVG
NKNKAQAPSKPPLQLLPRHPVTRSRKRALLTDGSTSDK
NT seq
1017 nt
NT seq
+upstream
nt +downstream
nt
atgggtgtgttaaacatcaggatcaaccagaggctactgcactgcagacattgccaccga
cgccgacagccacccctcccgcccgccgacactcccctaccgcccgccgacactcactgc
tttttattggacagaatcatccatcagatgagattcaaatgcaacttctgcgactctgga
tacatcccctacagcaagtttctggtacacctgtgcggcactactcccgcccatctcaag
tccgtctttgccaggggagagtgcattctcgccacaagtgcccttgtgtgttgtgaatgc
agccttcctctccgacctcccattttcaggcgtctccctcggaaaattcctatttgtagt
gcctgctgccataatggtgatgtcaccagctaccgtcacagccgtgagctcgaacacctc
atccaaggcatcacggtgaaatgcaaggcttgcaaacaataccttccattctccaccttt
gcttcgcacaagctggtcaacttgtgtggggaagacaagcaaaaggctccttatgaggtt
ggtaaaatggataagagcattgttcacggtgatgaggttgggaatgatgatgactcatct
ggtgacaaccatggcacgagtgaggatgtgttcagttttgaagatgattcagtggaggaa
ggggaggaacttgaaaagcctaaggctgtgaaaagggtggctgtgaacgcctttaagaca
ctaccctgtgatagggaagcaaagatcacaatgccatatgggcagaaaccagcagctcct
actgcagcccaggccagtgcgtcgccgtttcgtcgcctacccatcatggcgccctcaaag
ccacctctaccaccgttcatacctcatcgcccaggcacccgtctcttccaagcagttggc
aacaagaataaggcccaggctccctcgaagccacctctacaactgttacctcgtcaccca
gtcacccgtagcaggaagagggcgctcttaactgatggctcaaccagcgacaaatga
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