Panicum hallii (Hall's panicgrass): 112890677
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Entry
112890677 CDS
T07366
Name
(RefSeq) exopolygalacturonase-like
KO
K01213
galacturan 1,4-alpha-galacturonidase [EC:
3.2.1.67
]
Organism
phai
Panicum hallii (Hall's panicgrass)
Pathway
phai00040
Pentose and glucuronate interconversions
phai01100
Metabolic pathways
Module
phai_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
phai00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
112890677
Enzymes [BR:
phai01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.67 galacturonan 1,4-alpha-galacturonidase
112890677
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Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
End_N_terminal
Motif
Other DBs
NCBI-GeneID:
112890677
NCBI-ProteinID:
XP_025813310
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Position
4:9217433..9218801
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AA seq
419 aa
AA seq
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MALSGDNTLRVFFFLAMVVCAAHAAKEAPKGKDEKKDDSAAAPGPSGGGGSSDISELGAK
GDGKTDCTKALNEAWTAACGKEGAQTLTIPKGDYLTGPLNFTGPCKGSVTIQLDGNLLGT
TDLKAYKTNWIEIQHVDNLVITGKGTIDGQGKQVWDSNKCAQKYDCKILPNSLVLDYVNN
GTVSGITLLNSKFFHMNVFQCKGITIKDVTVTAPGDSPNTDGIHMGDSSKVTITGTTIGV
GDDCISIGPGSTEINITGVTCGPGHGISIGSLGRYKDEKDVTDVNVKDCTLKKSTNGVRI
KSYEDAASTLTCSKVHYENIAMEDVANPIIIDMKYCPNKICTKNGASKVTIKDVTYKNVT
GTSSTPEAVSLLCSEKLPCTGVTMDNVKVEFKGTNNKTMAVCNNAKGSATGCLKELACI
NT seq
1260 nt
NT seq
+upstream
nt +downstream
nt
atggctttgagcggagataatacattgagggtattctttttcctcgcgatggtggtgtgc
gccgcgcacgcggcgaaggaagccccaaaggggaaggatgagaagaaagacgattccgcc
gcggcgccggggccctccggcggcggcggatcctccgacatatccgagctgggagccaag
ggtgacggcaagacggactgcaccaaggcgctgaacgaagcgtggacggcggcgtgcggc
aaggagggggcgcagacgctcacgatccctaagggtgactacctgacaggccccctcaac
ttcactggcccgtgcaagggcagcgtcaccatccagctcgacggcaacctgctcggcacc
accgacctcaaagcgtacaagaccaactggatcgagatccagcatgtcgacaacctcgtc
atcactggcaagggcaccatcgacggccagggcaagcaagtctgggacagcaacaaatgt
gcccagaaatacgactgcaagatcctgcccaactcattggtgctcgactacgtaaacaac
ggcaccgtctccgggatcaccctgctgaactccaagttcttccacatgaacgtgttccag
tgcaagggcatcacaattaaggacgtgaccgtcaccgctccgggagacagccccaacact
gacggcatccacatgggagactcgtccaaggtcaccatcaccggaaccaccatcggcgtc
ggtgacgactgcatctccattggccctggcagcaccgagatcaacatcaccggagtcacc
tgcggccccggccatggcatcagtatcggcagcctgggcaggtacaaggatgagaaggat
gtgaccgacgtgaacgtcaaggactgcacgctcaagaagagcaccaacggtgttcgcatc
aagtcttatgaggacgccgcatcgacgctcacctgctccaaggtccactacgagaacatc
gcgatggaggacgtggccaaccctatcatcatcgacatgaagtactgccccaacaagatc
tgtaccaaaaacggcgcctccaaggtcaccatcaaggacgttacctacaagaacgtcact
ggcacctcgtccacccccgaggccgtcagcctcctttgctcggagaagctgccatgcacc
ggcgtcactatggataacgtcaaggttgagttcaagggcaccaacaacaagaccatggcg
gtctgcaacaatgcaaagggcagcgccacgggctgcctcaaggagctggcttgcatatga
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