Panicum hallii (Hall's panicgrass): 112890873
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Entry
112890873 CDS
T07366
Name
(RefSeq) ubiquitin receptor RAD23d-like
KO
K10839
UV excision repair protein RAD23
Organism
phai
Panicum hallii (Hall's panicgrass)
Pathway
phai03420
Nucleotide excision repair
phai04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
phai00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
112890873
09124 Replication and repair
03420 Nucleotide excision repair
112890873
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
phai03051
]
112890873
03400 DNA repair and recombination proteins [BR:
phai03400
]
112890873
Proteasome [BR:
phai03051
]
Eukaryotic proteasome
Proteasome interacting proteins (PIPs)
UBL-UBA shuttle proteins
112890873
DNA repair and recombination proteins [BR:
phai03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
XPC-HR23B-CETN2 complex
112890873
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UBA
XPC-binding
ubiquitin
UBA_7
UBA_Ucp12
Rad60-SLD
CUE
UBA_RAD5A
Dsc3_N
Rad60-SLD_2
Crinkler
STI1-HOP_DP
Motif
Other DBs
NCBI-GeneID:
112890873
NCBI-ProteinID:
XP_025813528
LinkDB
All DBs
Position
4:47541298..47547665
Genome browser
AA seq
414 aa
AA seq
DB search
MKLNVKTLKGTSFEIEASPEESVAGVKRIIETTQGQSVYPADNQLLIYQGKILKDDTTLE
SNKVAENSFLVIMLSKAKASSSGPSTATPATPAKAPATPAQAATPAASAASVARSTPPQA
PVATAVTVPPSPQPSPAPAATAPAATVDASGDADVYSQAASNLVSGNNLEQTIQQILDMG
GGTWERDTVVRALRAAYNNPERAIDYLYSGIPENVEAPPVARAPASGQQTNPQAPSLAQA
AVAPPVQPSPASAGPNANPLNLFPQGVPSGGANPAAGAGAGAGALDALRQLPQFQALLQL
VQANPQILQPMLQELGKQNPQILRLIQENQAEFLRLVNESPEGAAGGNILGQLAAAMPQA
VTVTPEEREAIQRLEGMGFNRELVLEVFFACNKDEELAANYLLDHGHEFDEQQQ
NT seq
1245 nt
NT seq
+upstream
nt +downstream
nt
atgaagctcaacgtcaagaccctgaagggcaccagcttcgagatcgaggcgagccccgag
gagtcggttgctggggtgaagaggatcatcgagacaactcagggtcagagcgtctaccct
gcggacaatcagttgcttatataccaagggaaaattctcaaggatgacaccactttggaa
agcaacaaagttgctgagaacagcttccttgttataatgctgtccaaggctaaggcatcg
tcaagtggaccttctaccgctactcctgctactcctgcaaaagctcctgcaactccggcc
caagctgctacgcctgcagcctcggctgcttcagttgcaagatcaacacctccacaagca
cctgttgccacggcagtaacggtacctccaagtccacagccttcacctgctcctgctgct
actgctccagctgctacagtcgatgcatccggtgatgctgatgtgtacagtcaggcagca
tcaaaccttgtctctggcaacaatctagaacagactatccaacagattcttgacatgggt
ggtggtacatgggaacgcgatactgttgtccgtgctctacgtgctgcatataataaccct
gagagggcaatagactacctgtattctggaattcctgagaatgttgaggccccgcctgtg
gctcgagcacctgcttctggccaacaaacaaatccgcaggctccttcacttgctcaggct
gcagttgcaccaccagtgcagccatcccctgcctctgcagggcctaatgcaaatcctcta
aacctttttcctcagggtgttccaagtggtggggccaatccagctgctggtgctggtgca
ggagctggtgcccttgatgccttgcggcagcttccacagtttcaagcactgcttcaattg
gtccaggctaatcctcaaatcttacagccaatgcttcaagagctaggcaaacaaaaccca
caaatcctgcggttgattcaggaaaatcaggctgagtttctccgcttggtgaatgaaagt
cctgagggtgctgctggaggaaacatactaggtcaactagcagcagcaatgccacaagcg
gtgacagttactccggaggaacgggaggctatccagcggctcgagggaatgggtttcaat
cgtgagcttgtgctggaggtcttctttgcgtgcaacaaggacgaggagctcgctgccaac
tacctcctggatcatggccacgagttcgacgagcagcagcaatag
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