Panicum hallii (Hall's panicgrass): 112890925
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Entry
112890925 CDS
T07366
Name
(RefSeq) soluble starch synthase 2-3, chloroplastic/amyloplastic-like
KO
K00703
starch synthase [EC:
2.4.1.21
]
Organism
phai
Panicum hallii (Hall's panicgrass)
Pathway
phai00500
Starch and sucrose metabolism
phai01100
Metabolic pathways
phai01110
Biosynthesis of secondary metabolites
Module
phai_M00854
Glycogen biosynthesis, glucose-1P => glycogen/starch
Brite
KEGG Orthology (KO) [BR:
phai00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00500 Starch and sucrose metabolism
112890925
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
phai01003
]
112890925
Enzymes [BR:
phai01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.21 starch synthase (glycosyl-transferring)
112890925
Glycosyltransferases [BR:
phai01003
]
Polysaccharide
Storage polysaccharide
112890925
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Glyco_transf_5
Glyco_trans_1_4
Glycos_transf_1
GT4-conflict
Glyco_transf_4
Motif
Other DBs
NCBI-GeneID:
112890925
NCBI-ProteinID:
XP_025813596
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All DBs
Position
4:46170720..46175129
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AA seq
760 aa
AA seq
DB search
MSSAAASSAFILALSSGTPGGRRRGAPPFRSGASLNFPLWAPPPPPPRAPRDDATVARAE
AGPGGRDAAPPERRAGAGADATSRQPNARRKAVSRRRDPVQPVGRYGSGPGNAGASQNGA
LAGGEIKSIVAAPPASIVKFAGPGYTVILPTQDVAPRAVVPAPEPPLPPSEENFVSRPAS
IPKPGTDGNAGFGEVDVERVPNPIPPPPPAPEPEPAVQEQEAAWDFKKYIGFDEPDETKD
EAGVDADVAGSFEDYENDDPGPLAGENVMNVIVVAAECSPWCKTGGLGDVAGALPKALAR
RGHRVMVVVPRYGDYAEAFDMGITKYYKAAGQDLEVKYFHAFIDGVDFVFIDAPLFRHRQ
GDIYGGNRQEIMKRMILFCKVAVEVPWHVPCGGVCYGDGNLVFIANDWHTALLPVYLKAY
YRDNGRMQYTRSVLVIHNIAHQGRGPVAEYPYMDLPEHYLQHFELYDPVGGEHANIFAAG
LKMADQVVTVSRGYLWELKTVEGGWGLHDIIRSNDWKINGIVNGIDHQEWNPEVDVHLRS
DGYTNYSLRTLDAGKRQCKAALQRELGLEVRDDVPLLGFIGRLDGQKGVDIIGDAMPWLA
GQDVQLVMLGAGRADLERMLQNLERTHHDKVRGWVGFSVPMAHRITAGADVLLMPSRFEP
CGLNQLYAMAYGTVPVVHAVGGLRDTVAPFDPFGDAGLGWTFDRAEPNKLIEALGHCLDT
YRKYKESWRAIQARGMSQDLSWDHAAELYEKVLVKAKYQW
NT seq
2283 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtcggcggccgcctcgtccgccttcatactcgcgctctcctccggcacccccggg
ggacgcaggcgcggcgccccgccgttccgcagcggcgcgagtctgaacttcccgctctgg
gcgccgccgccgccgccaccgcgcgcgccgcgggacgacgcgacggtggcgcgcgcggag
gccgggccggggggcagggacgcggcgccgccggagcggagggccggcgccggcgccgac
gccaccagcaggcagcccaacgcgcggcgcaaggcggtctccagacggagggatcctgtt
cagccggtcggccgttacggctccgggccggggaacgcgggggccagccagaacggcgcg
ctggcggggggtgagatcaagtccatcgtcgccgcgccgccggcgagcatagtgaagttc
gcaggcccgggctacaccgtgatccttccaacccaggacgtagcgccgagggctgtcgtc
ccggccccggagccgccattgccaccgtctgaggaaaactttgtgtcgcgaccagcttcc
attcccaagcccggcaccgacggcaatgccggatttggagaggttgacgttgaaagagtt
ccaaatccaattccacctcctccgcctgcacctgagcctgagcctgcggtgcaagaacaa
gaggctgcttgggatttcaagaaatatatcggtttcgacgagcctgatgaaacgaaggat
gaggccggggttgatgcagatgttgctggttcttttgaagattacgagaacgatgatcct
ggtcctttggctggggagaatgtcatgaacgtgatcgtggtggctgctgaatgttctccc
tggtgcaaaacaggtggccttggagatgttgcgggagctctgccgaaggctttggcgaga
agaggacatcgtgttatggttgtggtaccaaggtatggggactatgcggaagcctttgac
atgggaatcacgaaatactacaaagctgcaggacaggacttggaagtgaaatatttccat
gcatttattgatggagtcgattttgtgttcattgatgcacctctcttccggcaccgtcaa
ggtgacatatatgggggaaatagacaggaaattatgaagcgcatgattttgttctgcaag
gttgctgttgaggttccttggcacgttccatgtggcggtgtgtgctatggtgatggcaat
ttggtgttcattgctaacgattggcacactgcactcctgcctgtttatctgaaagcatat
tacagagacaatggcagaatgcagtacactcgttccgttcttgtcatacataacatcgct
caccagggtcgcggccctgtagctgagtacccgtacatggacctgcctgaacactacctc
cagcacttcgagctgtacgaccccgtcggcggcgagcacgccaacatcttcgccgcgggc
ctgaagatggcggaccaggtggtcaccgtcagccgcggctacctgtgggagctgaagacg
gtggaaggcgggtggggcctccacgacatcatccggtccaacgactggaagatcaacggc
atcgtgaacggcatcgaccaccaggagtggaaccccgaggtggacgtgcacctccggtcg
gacggctacaccaactacagcctccggacgctggacgccggcaagcggcagtgcaaggcg
gcactgcagcgggagctcggcctcgaggtgcgcgacgacgtgccgctgctcgggttcatc
gggcggctggacgggcagaagggcgtggacatcatcggtgacgcgatgccgtggctggct
gggcaggacgtgcagctggtgatgctgggcgccgggcgcgcggacctggagcggatgctc
cagaacctggagcggacgcaccatgacaaggtgcgcggatgggtggggttctcggtgccc
atggcgcaccgcatcacggcgggcgccgacgtgctgctgatgccgtcccggttcgagccg
tgcgggctgaaccagctgtacgcgatggcgtacggcaccgtccccgtggtgcacgccgtg
ggcgggctgagggacacggtggcgccgttcgacccgttcggcgacgccgggctcgggtgg
acgttcgaccgcgccgagcccaacaagctgatcgaggcgctcgggcattgcctcgacacg
taccggaagtacaaggagagctggagggccatccaggcgcgcggcatgtcgcaggacctc
agctgggaccacgccgccgagctctacgagaaggtcctcgtcaaggccaagtaccagtgg
tga
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