Panicum hallii (Hall's panicgrass): 112890939
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Entry
112890939 CDS
T07366
Name
(RefSeq) sister chromatid cohesion protein PDS5 homolog A isoform X1
KO
K11267
sister chromatid cohesion protein PDS5
Organism
phai
Panicum hallii (Hall's panicgrass)
Brite
KEGG Orthology (KO) [BR:
phai00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
phai03036
]
112890939
Chromosome and associated proteins [BR:
phai03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Adherin complex
112890939
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDS5
PTM_DIR17_Tudor
HEAT_2
Tudor_5
Motif
Other DBs
NCBI-GeneID:
112890939
NCBI-ProteinID:
XP_025813609
LinkDB
All DBs
Position
4:complement(37876029..37891076)
Genome browser
AA seq
1704 aa
AA seq
DB search
MAAAEQLKELGEKLQAAAPAPADELAKLLEKAAECLHGIEQSPGSSVMEAIQPSLKAFTR
EEFLKHEDEDVKVLLATCFCEITRITAPDAPYDDDVLRDIFYLIVGTFRGLSDVNSQTFG
RRVAILETVARYRACVVMLDLECDDLITDMFRTFLEVVSDSHEENIVKSMQTIMTLIVDE
SEDIQESLLHVLLSALGQKKTGAAMSGRKLARSVIEHSARKLEPYIKKFLTSSWAGDGSS
SNDQIDHHGIIVDVYQCAPKVLKVVVPYITGELLADEVDIRSKSVELLGEIFSLPGAPIV
EYFKTLFSEFLKRLTDRVVEIRISMVEHLKRCLISNPSRPEAPEIIKALCDRLLDYEENV
RKGVVAALCDVACHSPDAIPIDTIKVVAERVRDKSVAVKCYAMERLADIYKLYCQRSSDS
YSDDFEWIPGKILRCIYDKDFRSESIESILCASLFPPEFPMKGRVKHWVTAVTHFDKAET
KALESILLQKQRLQQEMLKYMSLRQLSQEDAPDLQKRIVGCFRSMSRSFSDPAKCEENLN
MLHQLKDGNIWKLFTSLLDCSTSFEKAWSLRADLLKILGEKHALYDFGGALAMRCSYLLV
NKEYAKEILSEASEQKTSGNTKLISACMNLLTAISSFFPSLLSGLEEDIVELLKEDNEVL
KEGIAHVLSKAGGNIREQLASSSSLDLLLERLCLEGTRRQAKYSVHALAAITKDDGLMSL
SVLYKRLVDLLEEKKVHLPSMLQSLGCIAQISMPIFETREEEIISFITTKILECNDQDMV
ENSSHKSEWGDSTQNCLLKIYGIKTLVKSYLPCKDAHAHPGIEKLFVILKNILTYGDISR
NMVSSAADKAHLRLAAAKAVLRLSRQWDHKVPVDVFYLTLRISQDDFPQVRKLFLCKVHQ
YIKERALDAKYACAFLFGVNDYHAPQYEEFKHNLIEVVQICQQVKMRQLSVQADMNLLTA
YPEYIISFLVHGLAHDPSTPDIEEYENVKAFGPIYWRLHLILSILLGEEGLQHSVPGMKK
ESFTTIISIFKSIKCSQDVVDGNKTKTLHAICDLGFLIAKRLCNDQTNLSEAQTVPLPVQ
LYMPLPDNQNKNSVESDEKMWLGCEKVLAHFDAVMTANIDKVKSPKHKMLIDETDEFGNE
VPLGKIVKLLKSQGEKKMGRKQKTPSSSVNAGNVDDVLGLVREINLDNQGDLGESQKRKP
KKRQTETKEINEKPLDFSSPKRKRSISNNRPHSAKSSKNSDEHLLHTPSKDRTLESKLKE
KKGRHDSTDTELLVSPSSKTPVSKGNKGAKKSHSDILNSGPKKFAVADSNKRTVEPRSLN
GSLKRQKPKPISGLVKCSTHDSSSTGLVGHRIKVWWPLDKRFYGGVVQSYDSSKKKHMVL
YDDGDVEVLNLAKEKWMPIESNDSSVKKQKKDHLLTNQGRAQERTTSSSKSSPNQQKSKK
RSLPQKRKGQPKNKRRKTAGGNKSVEGSSGAGGNDSDSSSSLALSDVDKDVNSDAQMEEE
VVISSAEKEKAGKDPKDVKIKEKAQKGSKDVEMKERAGKDLKDAEMEEKVGKESKDVGMK
EKAGKDSKNVKMKESQDVEGKEKAGKESKDVKMKEKAATEPKDVEAKEKAGKDPKDVKMK
EKVAEEPKDVEVNETAGKDSNDVEMKEKAGKESKDVKMKQKAGKESKDAEMEETEKQDDH
SLSSKEESDNETLSVWKKRTAKAT
NT seq
5115 nt
NT seq
+upstream
nt +downstream
nt
atggcggccgcggagcagctcaaggagctgggggagaagctgcaggcggcggcgccggcg
ccagcggacgagctcgccaagctcctcgagaaagctgcggaatgcttacatggaatagag
cagtcgccggggtcctcggtgatggaagctattcaaccaagtttaaaggctttcaccaga
gaagaatttctgaagcatgaggatgaagatgtcaaagttctcttggcaacttgcttctgt
gaaattacaagaataactgcacctgatgctccctatgacgatgatgttctaagggacata
ttctatttaattgtaggtacatttcgcgggctcagtgatgttaatagtcaaacctttggc
aggagagttgctattctcgaaacagttgctagataccgagcatgtgttgtgatgttagat
cttgaatgcgacgatcttattacagacatgtttcgaacgttcttagaagttgtcagtgac
agtcatgaagaaaacattgtaaagtcaatgcagacaataatgacccttattgtagatgag
agtgaggatatacaggagagtcttctacatgtactgttgtcagcattggggcagaagaaa
actggtgctgccatgtctgggcgtaagcttgctcgcagtgtcatcgagcattctgccaga
aaacttgaaccatacataaagaagtttctgacatcttcatgggctggggatggcagttct
tcgaatgatcaaatcgaccaccacggaattatagttgatgtttatcagtgcgctccgaag
gttcttaaggtggtcgtgccttatattactggggaactgctggcagatgaagtagatatt
cggtctaagtcagttgaattacttggggaaattttttcgttacctggagcccctattgtg
gaatatttcaagactctcttctctgagtttctgaagagactgactgatagagtagttgaa
attcgtatttctatggtcgagcatttgaagagatgtctaatatcaaatccttcccgacct
gaagctcctgaaattattaaggcactttgtgacagattgcttgattatgaagaaaatgtg
cgaaagggagtagtggctgcactttgtgatgtagcttgccattcacctgatgctattccg
attgacacaattaaagtagtagcagagcgtgttcgcgataaatcggtggctgtgaagtgc
tatgccatggagaggttggcagatatttataagctatattgccagaggagttctgatagc
tattctgatgattttgagtggatacctggaaaaatattaagatgtatttatgacaaagat
tttaggtcagagtcaatcgaatccattttgtgcgcttccttgttcccaccagagtttcca
atgaagggaagagtgaaacattgggttacagctgttacgcactttgacaaagctgagaca
aaagctctcgaatcgattcttctgcaaaagcaaagactgcaacaagaaatgctgaaatac
atgtcacttcggcaactaagccaggaagatgcccctgatctgcaaaaaagaattgttgga
tgtttccggagcatgtctcgctcattcagtgaccctgcaaagtgtgaggagaacttgaac
atgcttcatcagctaaaagatggcaatatctggaaattattcactagcctgcttgattgc
tcaacttcatttgagaaagcttggtctcttcgggcagacttgcttaagatacttggtgaa
aaacatgcgctttatgattttgggggcgcattagcaatgagatgttcatatttacttgtg
aacaaggagtatgccaaagagatcctgtcagaagcttctgaacagaagacttctgggaat
acaaagctcatctcagcatgcatgaatcttctaacggcaatttctagtttctttccatca
cttttgtctgggcttgaagaagacattgttgaactcctgaaggaggacaatgaagtgctt
aaagagggtattgctcatgtcttatcaaaggctggtggcaatattcgggaacagctagcc
tcatcaagttcccttgatcttctattagagcgtttatgcttagagggcacacggagacaa
gctaaatactctgttcatgcacttgctgcaattacaaaagatgatggtcttatgtcacta
tctgttctttacaagaggcttgtggatttgttggaagagaagaaagtgcatttaccatct
atgttgcaatctttggggtgtatagctcagatatccatgccaatttttgaaacgcgggaa
gaagagataataagtttcataactacgaaaattcttgagtgcaatgatcaggatatggtt
gaaaattcttctcataaatctgaatggggtgatagtacacagaattgcttgctgaagatt
tatggcatcaaaactttggtgaagagctatctaccttgcaaagatgctcatgcacaccct
ggaatagagaagttatttgttattctgaagaatattcttacctatggtgatatttctcga
aatatggtctcaagtgctgctgataaggcccatttgaggcttgccgcagcgaaagctgtt
ctccgcttatcaagacaatgggaccacaaagtacctgttgatgtattttatttgactctg
aggatttcacaggatgattttcctcaggtgagaaaattatttctttgtaaagtacatcaa
tatatcaaggagagggcattggatgcaaaatatgcttgtgccttcttgtttggcgttaat
gattatcatgcccctcagtatgaagagttcaagcacaatctgattgaagtggttcagata
tgccaacaagttaagatgcgccaactttcagtccaagcagatatgaatttgctgacggct
tacccagaatatataatttcctttttggttcatggccttgctcatgatccttcaacccca
gacattgaggaatatgagaatgtcaaagcatttggtccaatctactggcggttgcatctg
attctttcaattctcctgggagaagagggtttgcaacacagtgttccaggcatgaaaaag
gagagcttcactacaataatatctatattcaaaagcattaaatgttcacaagatgtggtt
gatggaaataagacgaagactctgcatgctatatgtgatcttggcttccttattgcaaag
aggttatgcaatgatcaaacaaatttatcagaagctcaaacagttccattgcctgttcaa
ctttacatgccgcttccggataaccaaaataaaaattctgtggagagtgacgagaagatg
tggttgggatgtgagaaagtactggcgcatttcgatgctgtaatgacagcaaacattgat
aaggttaaatctcctaaacataagatgcttattgacgagactgatgaatttggaaatgaa
gtaccccttgggaaaattgtcaaacttcttaaatcgcaaggagaaaagaagatggggaga
aagcagaagacgccatctagttcagtaaatgcaggcaatgttgatgatgtcctgggttta
gtaagagaaattaacttggacaaccaaggagatttgggggaatcgcaaaagaggaagcct
aagaagcgtcagactgagacaaaagagattaacgagaagccacttgatttttcttcacct
aaacgcaaaagatcaatttctaacaatagaccacattcagcaaaaagtagtaaaaatagt
gatgagcatctattgcatactccaagcaaagataggactctggaatctaagttgaaggag
aagaaaggcagacatgattcaactgatacagagctgctagtatctcctagtagtaagacc
cctgtatcaaaaggaaataagggtgctaagaaatcccatagtgacattttaaatagtggt
ccaaagaagtttgctgttgcagacagtaataagagaactgttgaaccgagaagtctaaat
gggtcactcaaaaggcagaaaccaaaaccgatttctggtttagtaaagtgctcaacgcat
gactcaagcagcacaggcttggtaggacaccgaataaaagtttggtggccattggataag
agattttatggaggcgttgtgcaatcatacgattcatccaagaaaaaacatatggtgcta
tacgatgacggagatgttgaagtgcttaacttggctaaagagaaatggatgccgattgaa
agtaatgattcatcagtgaagaagcaaaagaaagatcatcttttgacaaaccaaggaaga
gcacaggagagaacaactagcagcagcaagtcttcccctaaccaacaaaagtcaaaaaag
aggtccttacctcaaaagaggaaagggcagccaaagaacaaacgcagaaagactgcagga
ggaaacaagtctgttgaagggagcagtggagctggtggtaatgattcagactcatccagt
tcccttgctctctcagatgttgataaagacgtaaactctgatgcccaaatggaggaagaa
gtagtaattagctcagctgagaaagagaaggccgggaaagaccccaaagacgtgaaaata
aaagagaaggcacagaaggggtccaaagatgtggaaatgaaagagagggcagggaaggat
ctcaaagatgcggaaatggaagagaaggtggggaaagagtccaaagatgtgggaatgaaa
gagaaggcagggaaggactccaaaaatgtaaaaatgaaagagtcccaagatgtggaaggg
aaagagaaggcagggaaggaatcaaaagatgtaaaaatgaaagagaaggcagcgacagag
ccgaaagatgtggaagcgaaagaaaaggcagggaaggacccaaaagatgttaagatgaaa
gagaaggtagcggaagagccgaaagatgtggaagtgaatgagacggcagggaaggactcg
aatgatgtggaaatgaaagagaaggctggaaaggagtccaaagatgtaaaaatgaaacaa
aaggcagggaaagagtccaaagatgcagaaatggaagagacggaaaagcaggatgaccat
agtttgagcagcaaggaggaatcggacaacgaaaccctcagcgtgtggaaaaaacggaca
gcaaaagcaacatag
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integrated database retrieval system
