Panicum hallii (Hall's panicgrass): 112891382
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Entry
112891382 CDS
T07366
Name
(RefSeq) ABC transporter B family member 4-like isoform X1
KO
K05658
ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:
7.6.2.2
]
Organism
phai
Panicum hallii (Hall's panicgrass)
Pathway
phai02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
phai00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
112891382
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
phai02000
]
112891382
04147 Exosome [BR:
phai04147
]
112891382
04090 CD molecules [BR:
phai04090
]
112891382
Enzymes [BR:
phai01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
112891382
Transporters [BR:
phai02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
112891382
Exosome [BR:
phai04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
112891382
CD molecules [BR:
phai04090
]
Proteins
112891382
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
ABC_ATPase
SMC_N
AAA_29
AAA_22
AAA_16
Zeta_toxin
RsgA_GTPase
AAA_21
AAA_30
AAA_15
AAA_25
DLIC
AAA_24
DEAD
Motif
Other DBs
NCBI-GeneID:
112891382
NCBI-ProteinID:
XP_025814009
LinkDB
All DBs
Position
5:complement(22068772..22078251)
Genome browser
AA seq
1297 aa
AA seq
DB search
MVGRRGEGAEDRSSRVGNDDAAGGDGGGGIGAGAGPTKPPVAAAPVTAGRVPLHRLFAFA
DRTDALLMAVGALAAVANGMAQPLMTFIFGDVIDAFGSAESSNHVLHRVVKVIMNFVYLA
IGSGLASTLQVSCWTITGERQAARIRALYLEAILRQDITFFDMEMSTGQVIERMAGDTFL
IQDAIGEKVGKSIQLLSTFIGGFIIAFVRGWLLALVMLSSIPPIAIAGAIVSKLMTRLST
RMQAKYGDAGNVVEQTLGAIRTVVSFNGEKQAITTYNKFIRKAYESALQEGAVNGLGLGS
VMAILFCSYGLAVWYGSRLIVERGYNGGMIISVIMAVMIGAMSLGQATPSVTAFAEGQGA
AYRMFKIIERKPDIDIYDTTGIILDDIKGDVELKDVYFSYPTRSEHLVFDGFSLRIPSGT
TMALVGESGSGKSTVISLVERFYDPQAGEVLIDGVDIRRMKLGWIRGKISLVSQEPVLFS
TTIRENIAYGMENLTLDEIKRAIELANAAKFIDKLPNGLDTMVGERGTQLSGGQKQRIAI
ARAIVKNPRILLLDEATSALDLESERVVQEALNRIMLERTTIIVAHRLSTVKNADVISVL
QHGKMVEQGSHVELMKVPEGAYSQLVHLQDTRQAEESSNVDPDMIVTNGFGSRSISNKPR
SQSISRRSTSKGSSSFGHSGRHSFPAPLGLPDPMEFTEAPDIEETRDKMASTPKKAPIGR
LFYLNKPEAFVLALGSITAAMHGVIFPIYGTLISTAIKVFYEPPAELRKDSRFWASMFVV
LGACAFILIPIEYFLFGLAGGKLVERVRSLTFQSVMRQEINWFDKPEHSSGSIGARLSTD
ALNVKRLVGDNLALNVQTLSTVISGFTIAMVANWKLALIITVVVPLVGFQGYAQVKFLKG
LNKNAKLKYEEASQVATDAVGGIRTVAAFSAEKKVMETYEKKCESPIKQGIREGVVGGLG
FGFSFLAFYFTYALCFYVGAKFVQQGTATFPEVFRVFFVLVLATSGISRTSAVGADSTKA
NDAAASVFEILDRKSKINYGSEEGVIITSVRGDIDFQNVCFKYPSRPNVHIFKDLSLSIP
SGKTVALVGESGSGKSTVIALLERFYDTDSGKILFDDVELQALKVSWLRQQVGLVAQEPV
LFNDTIRANIAYGKQGEASEEEVVAAAEAANAHQFISALPDGYNTIVGERGIQLSGGQKQ
RVAIARAVIKDPKVLLLDEATSALDAESERVVQEALDQVMVGRTTVVVAHRLSTIRGADI
IAVLKNGAVAEKGRHEELMRIKGGTYASLVQLSSSSA
NT seq
3894 nt
NT seq
+upstream
nt +downstream
nt
atggtagggaggaggggggagggggctgaagatcgtagcagccgggtggggaacgacgac
gccgccggtggcgatggaggaggaggaataggggcgggagctggccctacgaagccgccg
gtggcggcggcgcccgtgacggcggggcgcgtgccgctgcaccggctcttcgcgttcgcg
gaccggacggacgccctgctcatggccgtgggcgccctcgccgcggtggccaacgggatg
gcgcagccgctcatgaccttcatcttcggcgacgtcatcgacgccttcggctccgccgag
tcctccaaccacgtgctccacagggtcgtcaaggtgatcatgaactttgtctaccttgcc
atcggatcagggcttgcttcaacacttcaggtatcttgttggacaataactggagaaagg
caggcagcacgaatcagagccttgtacctcgaggcaattctgagacaggatatcacattt
tttgacatggagatgagcactgggcaagtcattgagaggatggcgggagacacattcctc
attcaagatgccattggagaaaaggttggaaagtccatacaactcctttctacttttatt
ggtggcttcattattgcattcgtgagaggatggctcttagcccttgttatgctctcaagc
attcctccgatcgcaattgctggtgcgattgtatcaaagcttatgacaagactctccacc
cgcatgcaagcaaaatacggtgatgctggcaatgttgttgaacaaacacttggagccatt
cgaacggttgtttcattcaatggtgagaagcaggctataacaacgtataacaagttcata
agaaaagcatatgaatctgctctacaagaaggtgctgtaaatggacttggattgggttct
gtaatggcaatcttattttgcagttatggtttggcagtttggtacggatctagattgata
gttgagcgaggatacaatggtggcatgattatttctgtcataatggctgtcatgatcggt
gcaatgtccttaggtcaggcaaccccatcagtgaccgcttttgcagaaggtcaaggggca
gcatatagaatgttcaagataattgaacggaaaccagatatcgatatatatgataccaca
ggtattatattggatgacataaagggtgatgttgaactgaaggatgtgtacttcagctat
cctacaagatctgaacatttagtatttgatggattctcattgcgcataccaagtggtaca
actatggccctagttggagagagcggcagtgggaagtcaacagtgatcagtttggtggag
aggttctatgatccacaggctggagaagttttgattgatggtgttgacatcagaagaatg
aagcttggatggataagaggaaaaattagtcttgtcagccaagaaccagtgttgttctca
actacaatcagggaaaacattgcttatgggatggaaaatctaacacttgatgagatcaag
agagcaatcgagcttgcaaacgctgctaaattcattgataagctgccaaatggtcttgac
acaatggttggggaacgtggaactcaactgtctggagggcagaaacaaagaatagcaatt
gctagagcaattgtaaagaaccctaggatcttactacttgatgaagcaaccagcgcactg
gatttggaatctgagagggtagttcaagaagcattgaataggataatgttagaaaggact
acaattatcgttgctcatcgcctaagcacagtgaagaatgctgatgtgatatccgtccta
caacatgggaagatggtggaacaaggttcacatgtagaactgatgaaggtacctgaaggt
gcttactctcagctggtacatctgcaagacactcggcaagcggaagaatcttctaatgtc
gaccctgatatgatagtaacaaatggttttggctcaagatctattagtaacaaaccaaga
agccaaagtatctccaggagatcaactagtaaaggctcttcctcttttgggcatagtggt
aggcactctttccctgctccacttggcctacctgatccaatggaattcactgaagctcct
gatatagaggagactagagacaaaatggccagtactccaaagaaagctccaattggtaga
ctcttctatctgaacaaaccagaagcttttgtgcttgcacttggttccataactgctgcg
atgcatggagtcatttttccaatatatggaacattgatttcaacggcgataaaagtgttt
tatgagccaccagcagaactacggaaggattccaggttctgggcaagcatgtttgttgtg
ctaggtgcttgtgcctttattctgattccaatagaatacttcctgtttggattagctggt
gggaagcttgtggaacgcgtacggtcactgacatttcagagtgtgatgcgtcaagagatc
aactggtttgataaacctgaacactcgagtggatcgattggtgcaagactatccactgat
gctctgaatgttaagcgacttgttggggacaatttagcactgaatgtccagactctttca
actgtcatatcaggcttcacaatagcaatggtggcaaactggaagttggcactgattatc
actgtggtggttcctttagttggtttccaaggctatgctcaagtgaagttcctgaaaggt
ctcaataaaaatgcaaagttgaagtatgaagaagcaagtcaagtagcaactgatgcagtc
ggtggcatcagaactgtggcggcattttctgccgagaagaaggtgatggagacctatgag
aagaaatgtgaatctccaataaagcaaggaataagggaaggtgtcgttggtggcttgggg
tttgggttctcattccttgccttctactttacatatgctctctgcttctatgttggtgcc
aagtttgttcagcaaggaacagccacatttcctgaagtgtttagggtctttttcgtatta
gttttagcaacaagtggaatctcacgaacaagtgcagttggtgcagacagcaccaaggct
aatgatgcggctgcatctgtcttcgaaattcttgatcgtaaatccaagatcaattacggc
agcgaggaaggtgtgatcatcacaagtgtgaggggtgacattgatttccagaatgtgtgc
ttcaagtatccctcacgaccaaatgttcatattttcaaggatctatcattgagcattccg
tctggaaagactgttgcactagttggggagagtgggagtgggaagtccacagtgatcgca
ctgctagaaaggttttatgacacggactccggtaagatcctctttgacgatgtggaactt
caagccctaaaagtaagctggcttaggcagcaagtcgggctagttgcccaagagccagtg
ctgttcaatgacaccatccgcgccaacatagcttatgggaagcaaggggaagcatctgaa
gaagaggttgttgctgctgctgaagcagccaatgcacatcagttcatctccgccttgcct
gacgggtacaacaccattgtcggggaaagagggatccaattgtcaggcgggcagaagcag
cgtgttgccattgcgagggctgtcataaaggaccccaaggtgctgctgctggatgaggca
acaagcgcgctagacgcggagtcagagcgagtggtgcaggaggctctggaccaggtgatg
gtcggtagaacgaccgtggtggtggcacatcgtttatcaacgatcagaggtgcagacatc
atagctgtactgaagaacggggctgtagccgagaaaggcaggcacgaagagttgatgcgg
ataaagggtggaacctacgcttcgcttgttcagctaagctctagttctgcatga
DBGET
integrated database retrieval system
