Panicum hallii (Hall's panicgrass): 112891387
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Entry
112891387 CDS
T07366
Name
(RefSeq) RNA polymerase II C-terminal domain phosphatase-like 1 isoform X1
KO
K18998
RNA polymerase II C-terminal domain phosphatase-like 1/2 [EC:
3.1.3.16
]
Organism
phai
Panicum hallii (Hall's panicgrass)
Brite
KEGG Orthology (KO) [BR:
phai00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
phai01009
]
112891387
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
phai03021
]
112891387
Enzymes [BR:
phai01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.16 protein-serine/threonine phosphatase
112891387
Protein phosphatases and associated proteins [BR:
phai01009
]
HAD phosphatases
Fcp/Scp phosphatases
112891387
Transcription machinery [BR:
phai03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
112891387
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
dsrm
NIF
DSRM_2
Motif
Other DBs
NCBI-GeneID:
112891387
NCBI-ProteinID:
XP_025814020
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All DBs
Position
1:50756491..50766281
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AA seq
943 aa
AA seq
DB search
MFKSMVYYGNTSIGEVEVWPKGEASAGLAVAAWAREIRVDRLSPPSERCPPLAVMHTVAV
DARCLVMESRPPAASDVAPLPLVAMHAACLRDNKTAVVPLGDEELHLVAMTSRRNLTNHA
CFWGYRLPFGLYNSCLTMLNLRCLGIVFDLDETLIVANTSRSFEDRIDALQRKLSNETDP
QRRNGMLSEVKRYQDDKSILKQYIEGDQVYDDGKVYKAQPEVVPPLSDNQQPVTRPVIRL
QDKNIILTRINPLIRDTSVLVRLRPAWEDLCSYLIARGRKRFEVYVCTMAERDYALEMWR
LLDPDSRLINSVQLHDRMVCVKSGLKKSLLNVFHDGSCHPGMALVIDDRLKVWDEKDQSR
VHVVPAFTPYYAPQAEANCSIPVLCVARNVACNVRGSFFKDFDEGLLPRISNISYEDEIN
DISSALDVGNYLITEDENVAAVNGNRDALPFDGMADAEVDRRMKEASGSAQAFHPTVASF
VMPVAPAQNLVSSSVAPVAPPLGMTPPPFNQPVVQPGFSDPLQGSPAREEGEVPESELDP
DTRRRLLILQHGQDTRDPTPPLPAIPPVQVPVPPVQVPVPPVQPHGNWFPTEDGINPSNL
NRGSAGFTVQSDSMLYEKKQAPHPSFFHGGDSPMSSDRFSYQNQRFSTQLSHIEDHHMLQ
NHGPPKYIAFSGEELSTRHVPSRQRNNQMESGRHFAQYAGTSAGILEGIALKCGSKVEYR
STLCDTAELQFSIEVWIVGEKIGEGIGRTRREAQRQAAEMSLRNLANKYLSSDPNKMTAL
KENGFGSNHNFFGYSGNTRDDMLPVPSTSEESRFMKMEDNNSQKTGGSVAALKELCTIEG
YNLNFQARPSPPDGSLGKESYAQVEVGGQILGKGVALTWEEAKLQAADEAIVTLRSMLGQ
LGHKRSGSPRSLAPNFNKRFKPDFPRVQRVPYGTYSRIEGHVP
NT seq
2832 nt
NT seq
+upstream
nt +downstream
nt
atgttcaagtcgatggtttattacgggaacacctcaatcggagaggttgaggtgtggcca
aagggcgaggcgagcgccggcttggccgtggcggcgtgggcacgagaaatccgcgttgac
cgcctttccccgcccagcgagcggtgcccgccgctcgccgtcatgcacacggtggccgtc
gacgcccgatgcctcgtcatggagtccaggccgcccgccgcctccgacgtggcgccactg
ccgcttgttgccatgcacgccgcgtgcctcagggacaacaagaccgcagttgttcctcta
ggagatgaagaattgcatttagttgcgatgacgtccagaagaaacttgacaaatcatgca
tgtttctggggctatagattgccatttggcttgtacaattcttgcttgaccatgttaaat
cttcgatgcctgggtattgtgtttgaccttgatgagacgttgattgttgccaatacatca
cggtcttttgaggacagaattgatgctcttcaaagaaagctgagtaatgagaccgatcca
cagcgtaggaatggtatgctatcagaggtcaagaggtaccaagatgataagtccatccta
aagcaatatatagaaggtgatcaggtctacgatgatggaaaagtgtataaagcgcaacct
gaggttgttccaccattgtctgataaccagcaaccagtgacacgtccagttataagatta
caagataaaaacattatcttgacaaggataaatcctctgataagggatacgagcgttctg
gtccgtctaaggccagcctgggaggatctttgcagttacttaattgcaagagggcgcaag
cgttttgaggtctatgtgtgtacaatggcagagagagattatgctttagaaatgtggaga
ttgcttgatccagattcaagattgattaattctgttcaacttcatgatcgaatggtgtgt
gtaaaatctggtttgaaaaagtccttgctaaatgttttccatgatggttcttgccatcct
gggatggcattagtaattgatgatcgcctaaaagtttgggatgagaaagatcaatctaga
gttcatgtggttccggcattcactccatattatgctcctcaagcagaggcaaattgttct
atcccagttctgtgtgtcgctagaaatgttgcatgcaatgttaggggtagtttcttcaaa
gacttcgatgaaggcctcttgccaaggattagtaatatttcctatgaggatgagataaat
gatatctcatctgctctggatgttggcaactatttgataacagaggatgagaatgttgcg
gcagtgaacggaaatagagatgcattgccttttgatggtatggcagatgctgaggttgac
cggagaatgaaggaagcatcaggcagtgctcaagcatttcatccaacagtggcgagcttt
gtcatgccagtggcccctgcccagaatttagtttcatcttcagtcgcaccagtagcccca
ccccttgggatgaccccacctccattcaaccaaccagttgttcaaccaggtttttcagat
ccactgcaaggttctccagctagagaagagggcgaagttcctgagtctgagttggatccg
gacacaaggagaaggcttctcatattacagcatggtcaagacacaagagatcctacgcct
ccactcccagcaataccaccagtgcaagtcccagttccaccagtgcaagtcccagttcca
ccagtgcaacctcatgggaattggtttcccacagaggatggtattaatccaagtaatctg
aatagaggttcagcaggtttcactgtacaatctgattctatgctctatgagaaaaagcag
gcacctcatccttcattctttcatggtggggatagtcctatgtcctctgatagatttagc
tatcagaaccagaggttttccactcagctatcacatattgaggatcaccacatgcttcag
aaccatggacctccgaaatacatagccttttctggtgaggagctatcaactcggcatgtt
ccctcaaggcagagaaacaaccagatggaatcaggaagacactttgcacaatatgcaggg
acctctgctggcatactagagggaattgcgctgaagtgcggatctaaggtggagtacagg
tcaacattatgtgatactgcagagctacagttctctattgaggtttggattgttggcgaa
aagataggtgaaggaattggtaggacaaggagagaagcacagcgtcaagctgcagaaatg
tcattaagaaacttggctaataaatacctgtcatctgatccaaataagatgactgctctg
aaagaaaatggtttcggtagcaaccataacttttttggatactctggaaatacgagggat
gatatgttgccagttccaagtacttctgaggaatctcgctttatgaaaatggaggataat
aactcccaaaaaacaggaggttctgttgctgctctcaaggaactttgcacgattgaggga
tataacttaaattttcaagctcgtccgtctcctccagatggctcacttgggaaagaatct
tatgctcaggttgaagttggcggacaaattctaggcaaaggagttgcgctaacatgggaa
gaggccaaactccaggctgctgatgaggctattgtaacgttaagatccatgctaggtcaa
cttggtcataaacggtctggttctccaaggtcattggcaccgaattttaataaacgcttc
aagccagattttccaagggtgcagagggttccttatggaacatactctaggattgaaggc
catgttccttga
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