Panicum hallii (Hall's panicgrass): 112891715
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Entry
112891715 CDS
T07366
Name
(RefSeq) small nuclear ribonucleoprotein Sm D2-like
KO
K11096
small nuclear ribonucleoprotein D2
Organism
phai
Panicum hallii (Hall's panicgrass)
Pathway
phai03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
phai00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
112891715
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
phai03041
]
112891715
03032 DNA replication proteins [BR:
phai03032
]
112891715
Spliceosome [BR:
phai03041
]
Complex A
U1 snRNP components
Sm proteins
112891715
U2 snRNP components
112891715
Complex B
U1 snRNP components
112891715
U4/U6.U5 tri-snRNP components
112891715
Complex C
U2 snRNP components
112891715
DNA replication proteins [BR:
phai03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (fungi)
Sm core complex
112891715
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
Hfq
Rad21_Rec8_N
EDRF1_N
Motif
Other DBs
NCBI-GeneID:
112891715
NCBI-ProteinID:
XP_025814435
LinkDB
All DBs
Position
5:528651..530977
Genome browser
AA seq
104 aa
AA seq
DB search
MAEEANGKKEEEEFSTGPLSVLMMSVKNNTQVLINCRNNKKLLGRVRAFDRHCNMVLENV
REMWTEIPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVLRNPK
NT seq
315 nt
NT seq
+upstream
nt +downstream
nt
atggcggaggaagccaatggaaagaaggaggaggaggaattcagcacgggtcctctgtca
gtgctgatgatgagcgtcaagaacaatacccaggttcttatcaactgccggaacaacaag
aagttacttggtcgtgtgagggcatttgatcggcattgcaacatggttcttgagaatgtt
agggagatgtggactgagataccaaagactggtaaaggcaagaagaaggctcttccggtg
aacaaagacaggttcataagcaagatgttcctccgtggggattcagtcatcattgttctc
aggaacccgaaatga
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