Panicum hallii (Hall's panicgrass): 112891730
Help
Entry
112891730 CDS
T07366
Name
(RefSeq) E3 ubiquitin-protein ligase SINAT5-like
KO
K04506
E3 ubiquitin-protein ligase SIAH1 [EC:
2.3.2.27
]
Organism
phai
Panicum hallii (Hall's panicgrass)
Pathway
phai04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
phai00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
112891730
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
phai04121
]
112891730
Enzymes [BR:
phai01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
112891730
Ubiquitin system [BR:
phai04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
SINA (Seven in absentia) proteins
112891730
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sina_TRAF
Sina_ZnF
Sina_RING
zf-C3HC4_2
DUF7567
Motif
Other DBs
NCBI-GeneID:
112891730
NCBI-ProteinID:
XP_025814458
LinkDB
All DBs
Position
1:complement(11966592..11970218)
Genome browser
AA seq
347 aa
AA seq
DB search
MELDSIECVSYSDGMEDDDDAAAVTSAQLPRPFLKSASSAGSAAAAVNVVVVSDRAGAAG
PGGAGPGAGPLVISPATGVHELLECPVCTNSMYPPIHQCQNGHTLCSTCKTRVHNRCPTC
RQELGDIRCLALEKVAESLELPCKYYSLGCPEVFPYYSKLKHESQCNFRPYNCPYAGSEC
SVVGDIPFLVAHLRDDHKVDMHSGCTFNHRYVKSNPREVENATWMLTVFHCFGQYFCLHF
EAFQLGMAPVYMAFLRFMGDENDARNYSYSLEVGANGRKMIWEGTPRSIRDSHRKVRDSH
DGLIIQRNMALFFSGGDRKELKLRVTGRIWKEQQNPDSGACIPNLFS
NT seq
1044 nt
NT seq
+upstream
nt +downstream
nt
atggagctggacagcatcgagtgcgtgtcctactccgacggcatggaggacgacgacgac
gccgcggccgtcacctccgcgcagctcccgcgccccttcctcaagtccgcctcctccgcc
ggcagcgccgccgcggccgtcaacgtggtcgtcgtctccgaccgcgccggggccgcgggg
ccgggcggggcggggcccggggccgggccgctggtcatatcgccggccacgggcgtgcac
gagctgctcgagtgccccgtctgcaccaactccatgtacccgcccatccaccagtgtcaa
aatggtcatactctgtgttccacctgcaaaactcgggtgcacaaccgctgcccaacctgt
cggcaggagctcggtgacatcaggtgtctggcattagaaaaagtggctgaatcacttgag
cttccctgcaaatactactctcttggttgtccagaggtcttcccatactacagcaagctc
aagcatgaatcacagtgcaattttaggccatacaactgcccatatgcaggttctgaatgc
tcagttgtaggtgatattccctttcttgttgctcatctacgggatgatcataaagtggat
atgcactctggatgtacatttaatcaccgctatgtcaagtccaacccaagagaggtcgaa
aatgcaacctggatgttaactgtttttcattgtttcgggcagtacttttgcttgcacttc
gaggccttccagcttggaatggcaccggtatacatggctttcctccggtttatgggtgat
gaaaatgatgctaggaactacagctatagccttgaggttggggcaaatggaaggaagatg
atatgggagggcactccccgcagcattcgggacagtcacaggaaggtcagagacagccat
gatggtctaataattcagcgaaacatggctctcttcttctcaggtggagataggaaagag
ttgaaactgcgggtcacaggtcgtatctggaaggaacagcagaatcctgactcgggagcc
tgcattcccaatctattcagctga
DBGET
integrated database retrieval system
