Panicum hallii (Hall's panicgrass): 112891906
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Entry
112891906 CDS
T07366
Name
(RefSeq) ABC transporter B family member 4-like
KO
K05658
ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:
7.6.2.2
]
Organism
phai
Panicum hallii (Hall's panicgrass)
Pathway
phai02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
phai00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
112891906
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
phai02000
]
112891906
04147 Exosome [BR:
phai04147
]
112891906
04090 CD molecules [BR:
phai04090
]
112891906
Enzymes [BR:
phai01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
112891906
Transporters [BR:
phai02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
112891906
Exosome [BR:
phai04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
112891906
CD molecules [BR:
phai04090
]
Proteins
112891906
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_22
ABC_ATPase
AAA_16
AAA_29
RsgA_GTPase
Zeta_toxin
AAA_21
AAA_15
AAA
DEAD
AAA_24
CRR42-like
DLIC
Rad17
Motif
Other DBs
NCBI-GeneID:
112891906
NCBI-ProteinID:
XP_025814694
LinkDB
All DBs
Position
5:complement(22198398..22220045)
Genome browser
AA seq
1232 aa
AA seq
DB search
MAVGAAAAVANGMARPLMTFILGDVIDAFGSADGSSNVAHRVSKVIMNFVYLAIGAGLAS
TLQVSCWTITGERQAARIRALYLKAILRQDIAYFDMEMSTGQVTERMAGDTFLIQDAIGE
KVGRSIQLLSTFIGGFIIAFVRGWLLALVMLSSIPPIAISFAIITKLRIRLSTHMQAKYG
DAGNVVEQTLGAIRTVVSFSGEKHAIKMYNKLIRKVYESALLEGIVSGLGLGSMELSLFC
SYGLAVWYGSRLIVEHGYNGGSVISIIMAVTIGAMCLGLATPSVTAFAEGQGAAYRMFKI
IERQPDIDIYDTTGIILEDIKGDVELKDVYFSYPTRPEYLVFIGFSLRVPSSTIMALVGE
SGCGKSTVISLVERFYDPQAGQVLIDGVDIRRMKLGWIRGKIGLVSQEPVLFSTTIRENI
AYGMENLTLEDIKAATELANAAKFIDNFPSGLDTMVGERGIQLSGGQKQRIAIARAIVKN
PKILLLDEATSALDMGSERVVQEALNRVMLQRTTIIVAHRLSTVKNADVISVLQNGKMVE
QGSHVELMKIPEGSYSKLIHLQETQPEAESSHIDNDMISTNDFGSTTINTEPRSKSFSAR
SVSKGSSSIGHSDRHSFSASPRIPDPTEFSPAPNIEDDKTHNVMTNGPKKAPIARLFYLN
KPEVFVLSLGSITAAMHGVILPLFGTLISIAIKTFYEPPEKLPKDSRFWASMFVTLGAYS
FVLNPVEYFLFGLAGGKLVERIRSLMFQSVMSQDINWFDKPEHSSGLIGARLSTNALIVK
QLVGDNLALNVQTLSTIVSGLTIAMVANWKMTLIITFVLPFVGLQAYAQMLFLKGVNKNA
KLKYEEASQVATDAVGGIRTVASFCAEKNVMETYEMKCKSPIRQGIREGVVGGLGFGFSL
AVFYFAYALCFYVGAKFVQQGKATFPEIFKVFFVLVLGAEGISRSSAIGADSNKVNDAAT
SVFEILDCKSKIDYSSEEGVTIASVRGDIDFQNVCFSYPLRPSIQIFKDLSLSIPSGKTV
ALVGESGSGKSTVIALLERFYDPDSGSIFLDDINLQTFKVSWLRQQVGLVSQEPVLFNDT
IRANIAYGRQGEASEEEIVAAAEAANAHEFISALPDGYNTIVGERGIQLSGGQKQRVAIS
RAIIKNPKVLLLDEATSALDVESERVVQEALDNVVVGRTTVVVAHRLSTIRGADAIAVLK
NGTVVEKGSHGELMRIKDGIYASLVELSSSSS
NT seq
3699 nt
NT seq
+upstream
nt +downstream
nt
atggccgtgggcgcggccgcggcggttgccaacgggatggcgcggccgctcatgaccttc
atcctgggcgacgtcatcgacgccttcggctccgctgatggctcctccaacgtcgcgcac
agggtctctaaggtgattatgaactttgtctatcttgccattggggcaggactcgcttca
acacttcaggtatcatgttggacaattactggagaaagacaagcagcacgaatcagagcc
ctgtatctcaaggctattctaagacaagacatagcatattttgacatggaaatgagtact
ggtcaagtgaccgaaaggatggcgggtgacacatttctcattcaagatgccataggggag
aaggttgggaggtccatacaactcctttctacttttattggtggcttcattatagcattt
gtgagaggatggctcttggctcttgttatgctctcaagcattcctccaatagctatttcc
tttgcaatcataacgaagttgaggataagactctccacccacatgcaagcaaaatatggt
gatgctggaaatgttgttgaacaaactcttggggccatcagaacggtagtttcgttcagt
ggcgagaagcatgctataaaaatgtataacaagttaataagaaaagtgtatgaatccgca
ctattggaaggtattgtaagtggacttggactgggttccatggagctatccttattttgc
agttatggattggcagtctggtacggatctagattgatagttgagcatggatataatgga
ggctcggttatttctattataatggctgtcacgatcggtgcgatgtgcttaggtcttgca
acaccatcagtgacagctttcgcagaaggtcaaggagcagcatatagaatgttcaagata
attgagcggcagccagatattgacatatatgataccacaggcatcattttggaggacatc
aagggtgatgttgaattgaaggatgtgtacttcagctatcctactagacctgaatatttg
gtatttatcggattttcattgcgagtaccaagtagcactattatggccctagttggcgag
agtggctgtgggaagtcaaccgtgatcagtttagtggagagattctacgatccacaggct
ggacaagtcttgattgatggagttgacattagaagaatgaagctggggtggataagagga
aaaattggtcttgttagccaagaaccagtgttgttctcaactacgatcagggagaacatt
gcatacggaatggaaaatctaacacttgaagacatcaaggccgctaccgagcttgcgaat
gcagccaaattcattgataactttccaagtggtcttgacacaatggttggtgaacgtgga
attcaactgtctggaggccagaaacaaagaatagcaattgccagagcaatcgtaaagaac
cctaagatcttactacttgatgaagcaactagtgcattggatatgggatcagagagggta
gttcaagaagctttgaatagggtaatgttacaaaggactacaattattgttgctcatcgt
ctgagcacagtgaagaatgctgatgtgatatcagtcttacagaatgggaagatggtggaa
caaggttcacatgtagagttgatgaagatacctgaaggttcttactctaagctaattcat
ctacaggagactcagccagaggcggaatcttctcatattgataatgatatgatatcaaca
aatgattttgggtccacaacgatcaacaccgagccaagaagcaaaagtttctctgcgagg
tcagttagtaaaggttcatcttctattgggcatagtgataggcactctttctctgcctcg
cctcggatacctgacccaacagagtttagtcctgctccgaacatagaggatgacaagaca
cacaatgtgatgacaaatggtccaaagaaagctccaattgctaggcttttctatctgaac
aaaccagaggtttttgttctttcacttggttctattactgctgcaatgcatggagtcatt
ttgccattatttggcacattgatttcaattgcaataaagacattttatgagccaccagaa
aaactaccaaaggactccaggttctgggcaagcatgtttgttacattgggcgcttatagt
tttgttctgaatccagtagagtatttcctgtttggattagcaggtgggaagcttgtggag
cgcataagatcattgatgtttcaaagtgtaatgagccaagacatcaattggtttgataaa
cctgagcactcaagtggattgataggtgccaggctatcgaccaatgctcttatcgtgaag
caactagttggcgataacttagcacttaatgtgcagactttatcaactatcgtatcaggc
ctcacaatagcaatggtagcaaattggaagatgacactgattataacatttgtgctcccc
tttgtgggtttgcaagcctatgctcagatgttatttcttaaaggtgtcaataaaaatgca
aagttgaagtacgaagaagcaagtcaagtagcaactgatgcagttggcggcatcagaact
gtggcatcattttgtgccgaaaagaatgtgatggaaacctatgagatgaaatgtaaatct
ccaataaggcaaggaataagggaaggtgttgttggtggcttgggatttggcttctcatta
gctgtattctactttgcgtatgctctctgtttctacgttggtgcaaagtttgttcagcaa
ggaaaggcaacatttcctgaaatatttaaggtcttttttgtattagtattgggagctgaa
ggaatctcccgatcaagcgcaataggtgcagacagtaataaggttaatgacgcagccacc
tctgtctttgaaattcttgactgtaaatccaagatcgattacagcagcgaggagggtgtg
accattgcaagcgtgaggggtgacattgatttccagaatgtatgctttagttatccactg
cgaccaagtattcaaatattcaaggatctatcactgagtattccttctggaaagactgtt
gcactggttggggagagtggaagtgggaaatccacggtgattgcactgcttgagaggttc
tatgacccggattccgggagcatctttcttgacgacattaatcttcagaccttcaaagta
agctggcttcggcagcaagtggggctagtttcccaagagccagtactgttcaacgacacc
atccgcgccaacattgcttatgggaggcaaggggaggcttccgaagaagagatcgttgct
gctgctgaagcagccaatgcacacgagttcatctccgcccttcctgatgggtacaacacc
atcgtcggcgagagagggatccagttgtcaggtgggcagaagcagcgtgttgccatctct
agggccattataaagaatcccaaggtgttgctgctcgacgaggcaacgagtgcactggat
gtggagtcggagcgagtggtgcaagaggcactagacaatgtggtcgttggtcggactact
gtggtggtggcgcatcgcttatcgacaatcagaggtgcagatgccatcgctgtcctgaag
aatgggacggtagtcgagaaagggagccatggtgaactaatgcggataaaggatggcatc
tatgcttcacttgttgagctcagctctagttcttcgtga
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integrated database retrieval system
