Panicum hallii (Hall's panicgrass): 112891971
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Entry
112891971 CDS
T07366
Name
(RefSeq) amino acid transporter AVT1I-like
KO
K15015
solute carrier family 32 (vesicular inhibitory amino acid transporter)
Organism
phai
Panicum hallii (Hall's panicgrass)
Pathway
phai04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
phai00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
112891971
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
phai02000
]
112891971
Transporters [BR:
phai02000
]
Solute carrier family (SLC)
SLC32: Vesicular inhibitory amino acid transporter
112891971
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Aa_trans
Motif
Other DBs
NCBI-GeneID:
112891971
NCBI-ProteinID:
XP_025814772
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Position
5:complement(16343392..16344870)
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AA seq
429 aa
AA seq
DB search
MAGRDSPLDEPLLAPGKDGDEDAASMEAQHLLRRDKGASFSRSCLNLSNVISGVGVLSVP
YALAQGGWLSLALFALVGAVCYYTGELVARCMRAGGDAVRSYPDIGQLAFGRRGRKAIGA
VMYAELYLVAISFLILEGDNLDKLLPGTSVGLPGGYLLRGRQLFTLVATVVILPTTWLRD
LSVLAYVSAVGLVASAALTASLAWAGVAEHGFHARGGNVFSLAGLPTSLSLYFVCFSGHG
VFPTVYTSMRNKKNFTKVLLASSLLCSLNYTLTAVLGYLIYGDDVKSLVTLNLPSGKVYT
RVAILTTLITPLAKYALVIQPITTGVEEKLSLGSQGSLPRAAISTAVLVSTVVAACTMPF
FGYLMSFIGSSLNVTVAVLFPCLSYLRIYVPRGGVRGAEVAAIVGILVVGVCVAVVGTYT
SLHQIAGTF
NT seq
1290 nt
NT seq
+upstream
nt +downstream
nt
atggcagggcgggacagccctctcgacgagcccctcctcgctccgggcaaggacggcgac
gaggatgccgcgagcatggaggcgcagcacctcctccgtcgcgacaagggcgcctccttc
tcccggagctgcctcaacctcagcaacgtgatctcaggcgtcggggtgctgtccgtgccg
tacgcgctggcgcagggcggctggctcagcctggcgctcttcgccctcgtcggcgccgtc
tgctactacaccggcgagctcgtcgcccgctgcatgcgcgccggcggcgacgccgtcagg
agctacccggacatcggccagctcgcgttcggccgccgcggccggaaggcaatcggcgcc
gtcatgtacgccgagctctacctcgtcgccatcagcttcctcatcctcgagggcgacaac
ctcgacaagctgctccccggcacgagcgtcggcctccccggcggctacctcctgcgaggg
aggcagctcttcacgctcgtcgcgaccgtcgtcatactcccgacgacgtggctgagggac
ctcagcgtgctcgcctacgtgtcggcggtcgggctcgtcgcgtcggcggccctgacggcg
tctctggcctgggccggcgtggccgagcacggcttccacgccaggggaggcaacgtcttc
agcctcgccgggctgcccacgtcgctgagcttgtacttcgtctgcttctccggccacggc
gtcttcccgacggtgtacacctcgatgaggaacaagaaaaacttcaccaaggtcctgctg
gcctcctcgctgctctgcagcctcaactacacgctgacggcggttctagggtacttgatc
tacggggacgacgtgaagtcactggtgacactgaacctcccctcggggaaggtgtacacg
agggttgcgatcctgacgaccctgatcaccccgctcgccaagtacgcgctcgtcatccag
cccatcacgacgggggtagaggagaagctgtcgctcggcagtcagggcagcctccccagg
gcggccatcagcactgccgtcctcgtcagcacggtggtggcggcgtgcacgatgcccttc
ttcggctacctcatgtccttcatcgggtcctcgctcaacgtcacggtggccgtcctgttc
ccgtgcctgagctacctcaggatctacgtgcccagaggaggcgtccgcggcgccgaggtc
gcggcgatcgtcggcatactggtggtcggagtgtgcgtcgccgtcgtggggacttacacc
tccctgcaccagattgcgggcacattttga
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