KEGG   Panicum hallii (Hall's panicgrass): 112891993
Entry
112891993         CDS       T07366                                 
Name
(RefSeq) DNA excision repair protein CSB
  KO
K10841  DNA excision repair protein ERCC-6
Organism
phai  Panicum hallii (Hall's panicgrass)
Pathway
phai03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:phai00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    112891993
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:phai03036]
    112891993
   03400 DNA repair and recombination proteins [BR:phai03400]
    112891993
Chromosome and associated proteins [BR:phai03036]
 Eukaryotic type
  Chromatin remodeling factors
   B-WICH complex
    112891993
DNA repair and recombination proteins [BR:phai03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     Other TCR factor
      112891993
SSDB
Motif
Pfam: SNF2-rel_dom Helicase_C ResIII HDA2-3 AAA_34
Other DBs
NCBI-GeneID: 112891993
NCBI-ProteinID: XP_025814813
LinkDB
Position
5:52825780..52831160
AA seq 1210 aa
MDEEDDDQRLLHSLGVTSANIEDIEKKILSQAQADPKHDVEEVAAANDHERGDDAVPEAD
VQARLHQKLHSVQLEIDAVASTIKRAKHASGKQVDSSDSGDTQDKKKQKRAEHTSQDDPH
GGALQQALAAERLKSLKKAKAQIQKEITQLEPCPSGSDKRKDKMLAMPVEEEPRRKKKTL
MPSRGPKKMSAPKLKTMSYNDDDDFDSVLDGASAGFMETEREELIRKGLLTPFHKLKGFE
KRVELPGPSHRQNDPSDQVGETMEASRIAKFAQSMQQIAQSRPMTKLLDPESLPKLDAPT
APFQRLGRPLKRPVSPSSEEQEKKRRRNKTKRPLPNKKWRKANLLKESLLETDDEDDGVI
AASVSEDEDQAAEGFDGLPPVILEGGLRIPGTIYEQLFDYQKVGVQWLWELHCQRAGGII
GDEMGLGKTVQVLTFLGSLHNSGMYKPSIVICPVTLLQQWQREASRWYPKFKVKILHDSV
NGSSKKSKPYNDSDSEASWDSDSEEVKRAKPAKKWDDLISSVVNSGSGLLLTTYEQLRIL
GEKLLDIEWGYAVLDEGHRIRNPNAEITLVCKQLQTVHRIIMTGAPIQNKLSELWSLFDF
VFPGKLGVLPVFETEFSVPITVGGYANATPLQVSTAYRCAVVLRDLIMPYLLRRMKADVN
AQLPKKTEHVLFCSLTPEQRATYRAFLASSEVEQIFDGNRNSLYGIDVLRKICNHPDLLE
REHAAQNPDYGNPERSGKMKVVEQVLKVWKDQGHRVLLFTQTQQMLDILESFLTACDYQY
RRMDGLTPAKQRMALIDEFNNTDEIFVFILTTKVGGLGTNLTGANRIIIYDPDWNPSTDM
QARERAWRIGQTRDVTAYRLITRGTIEEKVYHRQIYKHFLTNKVLKNPQQRRFFKARDMK
DLFTLQDDEGNGLTETSNIFSQLSKDVNIRVPNEGQQDQVHIASTLPSTSESEPSNGGNG
KVDENSDQADEESNILKSLFDAQGIHSAINHDAIMNANDDQKVRLEAEASQVAQRAAEAL
RQSRMLRSRDSFAVPTWTGRSGAAGAPSSVRRKFGSTVNSQLISSSQPSETSSSRSQSLP
VGALNGKALSSAELLAKIRGTREGAASDALEHQLNRGSGSDHIPGPSGNGVRSSNSSNRS
MIVQPEVLIRQLCTFIQQNGGSASSTSITEHFKSRIQSKDMLLFKNLLKEIATLQRGADG
ATWVLKPDYE
NT seq 3633 nt   +upstreamnt  +downstreamnt
atggacgaggaggatgacgaccagcgcctgctgcacagcctcggcgtcacgtccgcgaac
atcgaggacatcgagaagaaaatcctctcgcaggctcaggctgacccaaagcatgatgtg
gaagaagtagcagctgccaatgaccacgagaggggtgatgatgccgtgcctgaggctgac
gtgcaggccaggctgcaccagaagctgcactccgtgcagctcgagatcgacgctgtagcc
tccaccatcaagagagctaagcacgcctccgggaagcaggttgacagctcagacagtggt
gacacgcaagataaaaagaagcagaagcgtgccgaacacacctcgcaggacgatcctcat
ggaggagccctccagcaggcgcttgccgccgagcgccttaagagccttaagaaagctaaa
gcgcagattcagaaagagataacgcagttggaaccctgcccgtcgggctcggacaaacgg
aaagataagatgctggccatgccggttgaagaggagccgaggcgtaagaagaagacacta
atgccatctcgagggcccaagaagatgtcggcaccaaaactgaaaaccatgagctacaat
gacgacgacgacttcgattctgtgcttgatggggcatctgcaggatttatggaaactgaa
agggaagaattgatcagaaagggcttgctgacaccctttcacaagttgaagggctttgag
aagcgtgttgaattacctgggccttctcataggcaaaatgatccctctgatcaagtcgga
gaaaccatggaagcttccaggattgctaagtttgctcagtcgatgcagcagattgcacaa
agccgcccaatgacaaaattgcttgatccagaatctttacctaaactggatgcacctact
gctccatttcaaaggctaggaagacctctaaaacgccctgtttctcccagttccgaggag
caggaaaagaagagacgaaggaataagaccaagaggcccttgcctaacaagaaatggagg
aaagccaacttattgaaggaatcacttttggaaactgacgatgaggatgatggggtcatt
gcggcatcagtatctgaggatgaagatcaagcagcagaaggttttgatggtttacctcct
gttatccttgaaggtggtttgagaattcctggcacaatttatgagcagctatttgactac
caaaaagtgggagtgcagtggctatgggaattacattgtcaaagggctggtggaattatt
ggagatgaaatgggcctaggaaagactgtgcaagtcttaacatttcttggttccttgcat
aacagtggcatgtacaagcccagcattgtcatttgtcctgtaacccttctgcaacagtgg
caaagggaggccagtcggtggtatccgaagtttaaagtgaagatcttgcacgattctgta
aatggttcaagtaaaaagagcaagccatataatgattctgacagtgaagcctcctgggat
agtgatagtgaagaggttaaacgcgcaaagcctgcaaaaaagtgggatgacttgatttca
agcgttgttaattcaggatcaggtttgcttttgactacatatgagcagctaagaatctta
ggggagaagttgcttgatatagaatggggatatgctgtgttggatgagggtcaccgtata
aggaacccaaatgctgagataacactggtgtgcaagcaactgcagactgtgcacaggata
atcatgacaggtgcacctattcaaaataaactttctgaactctggtccctttttgatttc
gtgttccctggaaaactgggtgtgctgcctgtatttgagactgagttttctgtgccaatt
actgttggtggttatgctaatgcaacgccattgcaagtgtccacagcttacagatgtgct
gttgtcttgcgtgatcttatcatgccataccttcttaggcgcatgaaagctgatgtcaac
gcacagctccccaagaaaacagagcatgttcttttctgtagtctgactccagagcagcgt
gctacttatcgtgctttccttgctagttcagaggtggaacaaatatttgatggcaataga
aattcactgtatgggatagatgtcctaaggaagatatgcaatcatcccgatctacttgag
agagaacatgctgctcagaatcctgactatgggaatcctgaaagaagtggaaagatgaaa
gtggttgagcaagttcttaaagtctggaaggaccaaggccaccgtgttcttcttttcact
cagactcaacaaatgttagacattttggagagcttcttgacagcatgtgactaccaatac
cgaagaatggatggactaacacctgcaaaacaaagaatggcactaattgatgagttcaat
aacacagatgaaatttttgttttcattctgaccacgaaagttggtggcctgggtacaaat
ttgactggtgcaaacaggattattatttatgatcccgactggaacccttcaacagacatg
caggccagggaacgtgcatggcgtattgggcaaactagagatgtgacagcttacagactg
atcacacgtgggacaatagaggagaaagtctatcatcgacagatatacaagcatttcctt
actaacaaagtattgaaaaacccacagcagaggagattctttaaagccagagacatgaag
gatttattcacactacaagatgatgaaggaaatggtttgacagaaacatcaaatattttc
agccaattgtctaaagatgtgaatattagggttccgaatgaaggtcaacaagaccaggta
catattgcttcgactctgccaagcaccagtgagtctgaaccatctaatggagggaatggg
aaagtggatgagaactctgaccaagcagatgaagaatcaaacattttgaagagtcttttt
gatgcccagggcattcatagcgcgatcaatcatgatgccataatgaatgctaatgatgac
cagaaggtgcgccttgaagcagaagcctcacaggtggcacaaagggcagctgaagcttta
cgtcaatctcggatgctcagaagccgtgacagctttgctgttcccacgtggactggaaga
tctggtgctgctggggcaccctcttctgttcgcaggaagtttgggtccacagtcaacagc
cagttgatcagttcgtcacagccatcagaaacttcaagcagcaggagccaaagtcttcca
gtaggtgctctaaatggcaaggcactgtcttctgccgaacttttggctaagatccgtgga
acccgagagggggctgcttcagatgcattggaacatcaactcaacagaggatcaggttcc
gatcacataccaggtccatcagggaatggcgtccgctcatctaactcttctaacagaagc
atgatcgtgcaacctgaagtcctgatccgtcagttgtgcaccttcatacagcagaatggt
gggtctgccagctccacgagcataactgaacacttcaagagccgcatacagtcaaaggat
atgcttctcttcaagaacctgcttaaggagatagcaacattgcaaaggggcgcagatggt
gccacgtgggtgctgaaacctgattacgagtga

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