Panicum hallii (Hall's panicgrass): 112892123
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Entry
112892123 CDS
T07366
Name
(RefSeq) protein HASTY 1
KO
K14289
exportin-5
Organism
phai
Panicum hallii (Hall's panicgrass)
Pathway
phai03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
phai00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
112892123
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
phai03016
]
112892123
03036 Chromosome and associated proteins [BR:
phai03036
]
112892123
Transfer RNA biogenesis [BR:
phai03016
]
Eukaryotic type
tRNA transport factors
tRNA export factors
112892123
Chromosome and associated proteins [BR:
phai03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Other miRNA pathway proteins
112892123
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exportin-5
Xpo1
Motif
Other DBs
NCBI-GeneID:
112892123
NCBI-ProteinID:
XP_025814987
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Position
5:complement(40860798..40885618)
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AA seq
1200 aa
AA seq
DB search
MAADPAAAAAASAAAAISAVMDWRSSPDARAAAFAYLESVKSGDVRALASTSFLLVRKDQ
TSEIRLHGFKMLQHLVRLRWEELSAAERNEFANLTINLISDVVGPHEVWALKSQTAALVA
EVVRREGVALWNTLLPSIVSLSNSGPIEAELVAMILRWLPEDITVHNEDLEGDRRRSLLR
GLTESLPEILPLLYSLLEKHFVAALSEHSKQQIDLAKQHAGTVTAVLNAVNAYAEWAPVT
DLAKHGLIHGCGSLLSYSDFRLHVCEFFKVICQRKRPLDVAVAEYDAAICNIFQVLMNIS
QQFLTRSGMQPSSIDESEYEFATCVCETMVALGSSNMQCILADGARTFQFLKQMLEYYQH
YKIALHFQSLLFWLVVLREPSKAKSVARVSGDNSTAGNSASTGDLSTEKEKKGVSLFVTD
EIYSTILDVSFKRMLKNSGGASSGLLELWSEELEGKSDFCNYRTKLLDLIKVIASQRPVI
AAASIVQRINVVFGDANPATKSPQDLDAMEGAQLGLEAVVSAIFDGSVDYGKTDLEMKSQ
LHKIFEGLLQQLLSLKWTGPNLAVIHGHYLDALGPFLRHYPDAVASVVNKLFELLTSLPI
TFQDPSNNSRLARLQICSSFIRISRAADKALLPHMKNIADTMAHLQGEGRLLRGEHNHLC
EAFLVMASSAGIQQQQEVLAWLLEPLNKMWTQVEWQTAYLSDPTGLTNMFADTQFMWSIY
HTVTFFEKALKRSGTKKSTTTPQAPTTTAAPGYLHPMSSHLAWILPPLLRLLRCIHALWA
EPFAQSQTGEIKAAKSITVAEQASLLGETGKLTKGQVAPADGLLEVQRDGESKENNIKNW
LRGIRDSGYNVLGLAATLGEAFFRCAEASSVTLALMENVQVMEFRHLRQLIHLVIIPFVK
YCPADLWQVWLVNLLQPLLVHCQQALHFSWSSLLHEGRAKVPDSIGNLSGSELKAEVMEE
KLLRDLTREVCSVLWALASPGLNSGLPSLEQLGPSNRMDSLKNLESFASSSLAGFLMLHV
GTALPALRISVEVFSWTDTDSVTKVIPFCGALIHLAVASNQAELRQFVAKDLFSSIIRGL
SVESNSVMSAELVGLCREIYVYLSDRDPAPRQVLLSLPHIKQEDLLAFDDSLSKTASPKE
QKQHMRSLLLLATGNKLRALAAQKTTNVITNVTTRNRSSIPHHGIAEEDGQIGLATLSST
NT seq
3603 nt
NT seq
+upstream
nt +downstream
nt
atggcggccgaccccgccgctgcggcggctgcctcggcggcggctgcgatctccgccgtc
atggactggcgctcctcccccgacgcccgcgccgccgccttcgcttacctcgaatcagtt
aagagcggagatgtccgagcattggcaagcacatcatttctcttggtacggaaggatcag
acatcagagatccgcttgcacgggttcaagatgttgcagcaccttgtaagattgaggtgg
gaggagctcagtgctgcagagcggaatgaatttgctaatttgaccattaatttgatatca
gatgttgttggccctcatgaggtgtgggccttgaagagccaaacagctgctttagtagca
gaggtagttagaagggagggagttgctttgtggaataccttactcccatctattgtttct
ctctctaacagtggtccaattgaggctgagttagttgccatgattctaaggtggcttcca
gaggatatcactgttcataacgaagatttggagggtgatagacggagatctctgttacgt
ggccttactgagtcactgccagaaatcctgccactgttgtattccctacttgagaaacat
tttgttgctgctttaagtgagcactcaaagcagcaaatagacttggctaaacaacatgca
gggacagtgacggctgttctaaatgctgtcaatgcatatgctgaatgggctcccgtgaca
gatctagccaaacatggtttaattcacggatgtgggtccttgctttcttacagtgatttt
cgcctccatgtttgtgagttttttaaagtaatatgtcagagaaaaagacctctggatgtg
gcagttgctgagtatgatgctgcaatctgcaacattttccaggtgttgatgaacatttcg
caacaatttttgaccagatctggcatgcagcccagttctattgatgaaagcgagtatgag
ttcgcaacgtgtgtttgtgagacaatggttgctctaggatcttctaacatgcaatgcata
ctagctgatggagctagaactttccagttcttaaaacaaatgctggagtattaccaacat
tacaaaatcgcgcttcatttccagtctttattgttttggctggtggtattgagagaacca
tcgaaagctaagtctgttgcacgtgtttctggtgacaactctaccgctggtaattctgca
tcaactggtgacttatcaacagaaaaggagaagaaaggggtatccctatttgttactgat
gaaatatacagtacaattttggatgtttcgttcaaaagaatgctcaagaacagtggtggt
gcatcttccgggttgttagaactatggagcgaagagcttgagggaaaaagtgacttctgc
aactaccgcaccaaattgttggatctcattaaagttattgcttcgcaaagacctgtgatt
gctgcagcaagcattgtccagagaataaatgttgtttttggagatgctaatccagcaact
aaatccccccaggatcttgatgcaatggaaggggctcagctggggcttgaagcagttgtc
agtgctatatttgatggctcagttgattatggaaagactgatttggagatgaaatcccaa
ctgcacaagatttttgaaggcttacttcagcagcttctttctttaaagtggacaggacct
aaccttgcagttattcatggtcattatttggatgctttgggtcctttcttgagacattat
ccagatgcagttgctagtgttgttaataagctttttgaactgttgacgtctctccccatc
acatttcaggatccatcaaacaattctcgcttagcaaggttgcaaatatgttcatcattc
atacgtatatcgagagctgctgataaagcacttctgcctcatatgaagaatattgctgat
accatggctcaccttcaaggagagggtcgtttactacgtggtgaacataatcatctatgt
gaagcatttcttgtgatggcatcctctgctgggattcaacagcaacaggaagtccttgcc
tggttacttgaacctctaaacaaaatgtggactcaagtggaatggcaaactgcatacttg
tctgaccctaccggtttgacaaatatgtttgctgatactcaatttatgtggtcaatttat
cacactgttacattctttgaaaaggcactcaaaaggagtggaaccaaaaagtctaccaca
actccacaagcacccaccacaacagcagcacctggttatctgcatccaatgtcttcacat
ctagcatggattctgccccctctcttaaggctgctgcgatgcatacatgctctttgggct
gagccgtttgctcagtctcagacgggggaaatcaaagcagcaaagagcattactgttgcg
gagcaggctagccttctaggagagacagggaaacttaccaaaggccaggttgctcctgct
gatggattgctggaagttcaaagagatggagaatccaaggaaaacaacataaaaaactgg
ttgcgcgggatccgagacagcgggtacaatgttttaggattggcagctactcttggggaa
gcattctttagatgtgcagaggcttcctctgtcacccttgctcttatggagaatgtgcaa
gttatggagtttcggcatttgcgccaacttatccaccttgttattattccatttgtgaaa
tattgccctgctgatctatggcaagtgtggctagtgaaccttttgcagccattacttgtt
cactgtcagcaagctcttcatttttcgtggtccagtcttcttcatgagggccgggctaag
gttccagacagcattggtaatctttctgggtcagaactgaaggcagaggtcatggaagag
aagttgctacgtgacttgactcgcgaagtgtgttctgtgctttgggctttagcatcacca
ggcttaaatagtggacttccgtccttggaacaacttggaccttccaaccggatggattct
ttgaagaatctggagtcttttgcttcaagttctcttgctggatttcttatgcttcatgtt
ggcacagcccttcctgcattgagaatatcagttgaagtgttcagttggacagatactgat
tctgtgactaaagttatccccttttgtggtgcactgattcacctcgctgttgcttcaaac
caggctgagttgaggcagtttgttgcaaaggatttattttcttctataatacggggttta
tctgttgaatcaaattcagtcatgagtgccgaacttgttgggctttgtcgggagatatat
gtctatctgtctgatagagatcctgcacctaggcaggttcttctttccctcccacacatc
aagcaggaagatttgctagcgtttgatgactctttgagtaaaactgctagtccgaaagag
caaaaacaacatatgcgaagcttacttctgctggctacagggaacaaattaagagctctt
gctgctcagaagacaactaatgtgattaccaacgttacaactcggaataggagctctatt
ccacaccatggaattgctgaagaagatggccaaattggattggccacattatcatcaaca
tga
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