KEGG   Panicum hallii (Hall's panicgrass): 112892129
Entry
112892129         CDS       T07366                                 
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein A2 homolog 1-like
  KO
K12741  heterogeneous nuclear ribonucleoprotein A1/A3
Organism
phai  Panicum hallii (Hall's panicgrass)
Pathway
phai03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:phai00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    112892129
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:phai03019]
    112892129
   03041 Spliceosome [BR:phai03041]
    112892129
Messenger RNA biogenesis [BR:phai03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Other transport factors
     112892129
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     112892129
Spliceosome [BR:phai03041]
 Common components
  Common spliceosomal components
   hnRNP proteins
    112892129
SSDB
Motif
Pfam: RRM_1 RRM_7 RRM_PARP14_3 Nup35_RRM_2 OB_RNB
Other DBs
NCBI-GeneID: 112892129
NCBI-ProteinID: XP_025815003
LinkDB
Position
1:complement(6400180..6404046)
AA seq 393 aa
MAGYPEDNQHALNGYEEEEVDEEEGHPGRRGGRDGGSGYGDAGAEDGRGAGGDSSGKIFV
GGVAWETTEETFSKHFEKYGAITDSVIMKDKHTKMPRGFGFVTFSDPSVIDKVLEDEHVI
DGRTVEVKRTVPREEMTTKDGPKTRKIFIGGLPPSLTEDELKDHFSSYGKVVEHQIMLDH
STGRSRGFGFVTFESEDSVESVISEGRMRDLGGKQVEIKKAEPKKHGSDHSSNGRSSHGG
GGGYRSSYRSGGAGSGSGGNSGGGAGGGGYGYGGAYRSGAAAGYGYDGGAGAGYGYGRGY
GYGGNAGFGSGFGGGYGGSMYGGAYGAYGAYGGGAYGGGAYGGGAYGGGAYGGAPGGYGA
GGYGGYGGAGGAGGAAGGSSGARGSSRYHPYGK
NT seq 1182 nt   +upstreamnt  +downstreamnt
atggcggggtacccggaggacaaccagcacgcgctgaacgggtacgaggaggaggaggtc
gacgaggaggagggccaccccgggaggcggggaggccgggacgggggctccgggtacggc
gatgccggcgcagaggacgggaggggagccggcggcgactcgtctgggaagattttcgtc
gggggcgttgcttgggagacgactgaagaaacgttctccaagcattttgagaagtatggg
gcaataactgattctgtaattatgaaggacaagcatactaagatgcctcgtggatttgga
tttgttacattttctgatccatctgttatagacaaggttttggaggatgagcacgttata
gatggcagaacggttgaggtcaagaggacagtccctagggaagaaatgaccaccaaagat
ggccccaagacaagaaagatcttcattggtgggctaccaccatcactaactgaagatgag
ttgaaggatcacttttcctcttatggtaaggtggtcgaacaccagataatgcttgatcat
agcactgggcgttctagagggtttggttttgtcacttttgaaagcgaggattctgttgaa
agtgtcatatcagaggggagaatgcgtgatcttggtgggaagcaggttgaaataaagaag
gctgaaccaaagaagcatggatctgatcacagtagtaatggtagatctagccacgggggt
ggtggtggttaccgtagttcttaccgtagtggtggagctggcagcggcagcggtggcaac
agtggtggtggtgccggcggcggcggttatgggtacggtggtgcttataggtctggtgct
gcagcaggttatggatatgacggtggtgcaggagcaggatatggctacggcagagggtat
ggctatggaggcaatgctggctttgggtctggttttggtggtgggtatggtggctccatg
tacggaggcgcttatggtgcatatggtgcctacggtggtggtgcttatggagggggtgca
tacggagggggtgcatatggaggtggtgcctatggtggtgccccaggtggctatggcgct
ggcggatatggtggctatgggggtgctggtggagcaggtggtgctgctggcgggagttca
ggtgctcgagggtctagcaggtatcatccatatggaaaataa

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