KEGG   Panicum hallii (Hall's panicgrass): 112892247
Entry
112892247         CDS       T07366                                 
Name
(RefSeq) UBP1-associated protein 2C
  KO
K12741  heterogeneous nuclear ribonucleoprotein A1/A3
Organism
phai  Panicum hallii (Hall's panicgrass)
Pathway
phai03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:phai00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    112892247
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:phai03019]
    112892247
   03041 Spliceosome [BR:phai03041]
    112892247
Messenger RNA biogenesis [BR:phai03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Other transport factors
     112892247
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     112892247
Spliceosome [BR:phai03041]
 Common components
  Common spliceosomal components
   hnRNP proteins
    112892247
SSDB
Motif
Pfam: RRM_1 RRM_7
Other DBs
NCBI-GeneID: 112892247
NCBI-ProteinID: XP_025815168
LinkDB
Position
5:15566456..15571261
AA seq 499 aa
MLAETQTRIDKNSPIPPRFSTSPFSSRPRPPLHLQTLARVLPSHPLLAPMDPFSKKRKPD
ENGAATASPAGGAAALGLTRDDVLRLLEPLSRDQLADIAAAAALVSAHALDAVRAAADRD
PALRKLFVRGLGWETTSDSLRAIFSAYGDLEEAVVITDKNTGRSKGYGFVTFRHADSAVL
ALKEPSKKIDGRMTVTQLAAAGAAGGPSGGAAGSGVAPVADVSLRKIFVGNVPADMSSER
LLAHFASYGEIEEGPLGFDKQTGKFRGFALFVYKTPEGAQASLVDSVKVIEGHQLVCKLA
IEGKKGKQGQSQQSGAANQQQQQQMMQGGPQEMQGGLGLGPGPQMGAQYGGPGSGLSSFG
AFGGVGGGFGGPNPYGNMPSSMGGGSTGGLGSMGGQVPTGLGGAGAGAFGPGGLGGGSFG
GSSQFGAGGMGAYGGIGMGGGSMYRMQQGGGGLPAGAFGEGGNYPLPGSGFRGQDPQGGM
SPGPGGRAPPMYPNVPPYF
NT seq 1500 nt   +upstreamnt  +downstreamnt
atgctcgcagagacgcagactcggatcgataaaaactcgccgatccctcctcgcttctcc
acctcccccttctcgtcccgaccccggccgccgctacacctccaaaccctagctagggtt
ttgcccagccatccccttctcgcccccatggatcccttctccaagaagcgcaagcccgac
gagaacggcgccgccaccgcctcccccgccggcggggccgccgcgctgggtctcacccgc
gacgacgtcctccgcctcctcgagccgctctcccgggaccagctcgccgacatcgcggcc
gccgccgcgctcgtctcggcgcacgcgctcgacgccgtgcgcgccgccgccgaccgggac
ccggccctccgcaagctattcgtgcgggggctcgggtgggagaccacctccgactcgctc
cgcgccatattctccgcctacggcgacctcgaggaggccgtggtcatcaccgacaagaat
acggggcggtccaagggctacggcttcgtcaccttccgccacgccgactccgcggtcctc
gcgctcaaggagccatccaagaagatcgacggccgcatgaccgtcacgcagctggctgcc
gccggcgcggccggagggccgtccggtggggccgcgggcagcggtgtcgctcctgtggca
gatgtctcccttcgaaaaatctttgtcggcaacgtccctgccgacatgtcgtccgagcgc
ctccttgcgcacttcgcctcttatggcgagatcgaggaggggccgctgggttttgacaag
cagacgggcaagttccgtggctttgccctctttgtttacaagacgcctgagggtgcgcag
gcctcgttagtggactcggttaaggtaattgagggccaccagcttgtatgcaagctcgca
atagaggggaagaaggggaagcaggggcaatcacaacaatctggggctgccaaccagcag
cagcagcagcagatgatgcagggtggtccacaggaaatgcagggagggcttgggcttggg
cctgggccgcagatgggagcgcagtatggtggccctgggagtggtctgtcttcatttggt
gcatttggtggtgttggtggcgggtttgggggtccaaacccttatggaaacatgccatct
tccatgggtggagggagcacaggtggtttaggctcaatgggaggccaggtgcctaccggg
ttgggtggggctggggctggcgcatttgggcctggtggattgggtggtggctcgtttggt
ggatcgtctcagtttggtgctggtgggatgggggcttatggcggtattggaatgggcgga
ggttccatgtaccgcatgcaacagggaggaggtgggctgcctgcaggtgcctttggtgaa
ggagggaactacccccttccagggtctggtttccgcggccaggaccctcaaggtgggatg
tcacctgggccaggtggcagggctcctcctatgtaccccaatgtgccgccttatttctaa

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