Panicum hallii (Hall's panicgrass): 112892254
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Entry
112892254 CDS
T07366
Name
(RefSeq) rhomboid-like protein 20 isoform X1
KO
K25216
ubiquitin-associated domain-containing protein 2
Organism
phai
Panicum hallii (Hall's panicgrass)
Brite
KEGG Orthology (KO) [BR:
phai00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
phai04121
]
112892254
Ubiquitin system [BR:
phai04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
LMBR1L-GP78-UBAC2 complex
112892254
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Gene cluster
GFIT
Motif
Pfam:
UBA
Rhomboid
UBA_7
DER1
CUE
UBA_RAD5A
DUF1751
Motif
Other DBs
NCBI-GeneID:
112892254
NCBI-ProteinID:
XP_025815179
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Position
5:7224451..7227164
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AA seq
305 aa
AA seq
DB search
MNGGLPGFHNAPASRAVVVAAALFSVPFGFRGRFLDLGLSYQNVYERLSIWRLITSLFAF
SSTPELIFGAALLYYFRVFERQIGSNKYAVFIVFSTMVSVLLQILALGYLKDPSINPLTS
GPYGLIFASYVPFFFDIPVSMRFRIFGLSLSDKSFVYLAGLQLLCSSGRCSVVPGVSGIL
AGLLYRLNTFGIRRLKFPEFVTSLFSRVSWPYSSNPYQGLPTTENDANISSHQVHQTQDA
HAATQDPTESSIAALAATQDPTESSIAALVSMGFDRSSAVQALVMTNYDVNLASNILLEA
QALQQ
NT seq
918 nt
NT seq
+upstream
nt +downstream
nt
atgaacggcgggctccctggattccacaatgcgccggcatcaagggccgtggtcgtcgcc
gccgcgctcttctccgtccccttcggcttccgcggccgcttcctggacctcggcctgtcc
taccagaatgtttatgaaaggttgagtatatggaggctgatcacctcgttgtttgctttc
tcgtcgacccctgagctgatatttggagccgcgctgctgtactactttagggtgttcgaa
aggcaaataggttctaacaagtatgctgtcttcatcgtattctcaaccatggtgtctgtg
ctgcttcaaatccttgctttaggttacctgaaagatccttctataaatcctctgacgtca
ggaccatatggcctcatttttgcatcttatgtgccattcttctttgacattccggtctca
atgaggtttcgcatatttggactaagcttaagtgataagtcatttgtatatttggctgga
ctccagcttctttgctcatctggaagatgttctgttgtacctggagtttctggcatacta
gctggccttttgtatcgcctgaatacatttggcatccgcaggttgaagttcccagagttt
gtaacatcactcttctcgcgggtatcgtggccctattctagcaatccttatcaagggttg
cccactacagaaaatgatgcaaacatttcttctcaccaggtacatcaaactcaggatgcg
cacgcagctacccaagaccccacagagtcctctattgccgcgctcgcagctacccaagac
cccacagagtcctctattgccgcgctcgtgtccatgggtttcgatcgtagctctgcagtt
caggcgcttgtaatgacaaactatgatgtcaatttggcctcgaacattctgcttgaagca
caagctctgcagcaatga
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